Acidithiobacillus ferrooxidans ATCC 23270: AFE_0693
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Entry
AFE_0693 CDS
T00810
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
afr
Acidithiobacillus ferrooxidans ATCC 23270
Brite
KEGG Orthology (KO) [BR:
afr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afr03000
]
AFE_0693
Transcription factors [BR:
afr03000
]
Prokaryotic type
Helix-turn-helix
Other families
AFE_0693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_2
Mg_chelatase
AAA
nSTAND3
AAA_3
MCM
GAF
AAA_16
bpMoxR
DUF815
nSTAND6
AAA_22
AAA_7
TsaE
RsgA_GTPase
HTH_50
TIP49
HTH_7
HTH_17
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ACK80284
UniProt:
B7J5Y9
LinkDB
All DBs
Position
622336..624267
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AA seq
643 aa
AA seq
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MDNDYITHAWDRCTGQYRLDVNGAPELQRLDAGNLGRLLEEQHLFVEIGSAEMTRLIKQT
LRFSEDAMLPSPDCTLLLLDAGGVALHAVGTELESGRDARYSGMDAGFIWREEYVGVTGP
SLCLHDMKPRMVHREEHLFRNFVEMACCAMPIWAPSGALLGVIDSTYSRSGYAKSAYVSV
MPLLAQLARRIEMKYFARNYQDHVILSVNRLNDYTDHDDEALFAINENGVIVAAEFALTK
GTIGDAKGGLVGANLRDVFDVSLDKMLDDHHRAEKSHSRTLLRNTGRHDGLRVFSLPDKV
SFTAVVNGILRNTPHSRDEASVQVHDSLLALSGDDAVVSENIRRIHKVLNKNISILLLGE
TGTGKDTLARAIHRASDRRDKPFVAINCAAIPESLIESELFGYEPGSFTGASRVGKQGKV
MAANGGTLFLDEIGDMPAALQGRLLRVLEEREVTPLGTTKASPVDIRVISATNKSINDLV
QQGGFRTDLLYRINDVVLSLPPLRERSDKIRLVETICQQECGVSEMEISAEVWNIFLGYS
WPGNIRELRSVIRTALALSDGNAIRCEDLPERLVTGERAGGRVTTAPATTPPWSDSDALE
RNRILAELERHHWRVIDTAKFLKVSRNTLYRKMRLYGIMDADA
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggataatgactatataacccatgcctgggatcgttgcaccggacaatatcggttggac
gtgaatggtgccccggaactgcaaagactggatgcgggcaacctcgggcgactgctcgag
gaacagcatctttttgtagagatcggatctgcggaaatgacgcgtctgattaaacagacg
ttgcgattttccgaggatgccatgctgccgtcaccagattgtacattgctgttgctggat
gccggcggtgttgctctgcacgctgtcggaacggaactcgagagcggacgtgatgcccgc
tattcgggtatggacgccggattcatatggcgggaagagtatgtcggggtgaccggaccg
agcctttgtctgcatgacatgaagccccgcatggtccaccgggaggagcatttatttagg
aactttgtggagatggcgtgctgcgcgatgcctatttgggcgccatctggcgcactgctg
ggggtgatcgattcaacctattcccgcagcggttatgcgaagtcggcatatgtctcggtc
atgccgctgctggcgcaactggcacggcggatcgaaatgaaatatttcgcccggaattat
caggaccatgtcattctgtcggtgaacaggctgaacgactataccgaccatgatgatgaa
gcattgtttgcaattaacgagaatggcgtcattgttgcggcggaattcgcgctgacgaaa
ggcactatcggtgatgccaagggcggtcttgttggtgcgaacttgcgggatgtgttcgac
gtttcgctggacaagatgctggacgatcaccatcgtgccgaaaagtcgcactccagaacc
ctgctccggaataccggaaggcatgatggtctgcgggtattttcgctgccggacaaagtg
tcgttcacggctgtcgtgaacggtattctccggaatacaccgcattccagggacgaagct
tcggttcaggtgcatgattccctgttggcgttgtcgggcgatgacgcggtggtatcggag
aatattcgtcgtatccataaagtattgaacaaaaacatcagtattctgctactgggcgaa
accggcactggcaaagatacccttgcgcgcgccatacaccgcgccagcgatagaagagat
aaaccttttgttgcgatcaattgtgcagccatacccgaatcgctcatcgagagcgagcta
ttcgggtatgagcccggctcctttaccggggcgagtcgcgtgggcaagcagggtaaggtg
atggccgccaatggtggcacgctgttcctcgatgaaatcggagacatgcccgccgcgctt
caggggcgtctgctgcgagttctcgaagaacgggaggttaccccccttggtaccaccaaa
gccagccccgtagatattcgggtgatcagtgcaaccaataagtcgatcaatgatctggtg
cagcagggaggctttcggactgacctgctttatcggattaatgatgtcgtgctaagcctg
ccgccactgcgggaacggagcgataaaatccggctcgtggaaaccatttgtcaacaggaa
tgtggcgtatctgaaatggagatatcagcggaagtatggaatatttttctgggttattcc
tggcctggtaatatccgcgaacttcgtagtgtgattcgtactgccctggcgctgagtgat
ggtaatgccatccgctgcgaagacctgccggaacggctggtgaccggcgaaagggccggt
ggccgcgtaacaacggcaccggcgaccacaccaccatggagcgatagcgacgcgctggag
cggaacagaatcctcgcggagttggagcgtcaccactggcgggtgatcgataccgcgaaa
ttcctcaaggtcagtcgtaatactttgtaccgtaaaatgcgcctgtatggcattatggac
gctgacgcataa
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