Acidithiobacillus ferrooxidans ATCC 23270: AFE_0845
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Entry
AFE_0845 CDS
T00810
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
afr
Acidithiobacillus ferrooxidans ATCC 23270
Pathway
afr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
afr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AFE_0845 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afr03400
]
AFE_0845 (uvrB)
DNA repair and recombination proteins [BR:
afr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AFE_0845 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AFE_0845 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
UB2H
Kinesin
AAA_22
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
ACK80349
UniProt:
B7J6R0
LinkDB
All DBs
Position
770300..772327
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AA seq
675 aa
AA seq
DB search
MDKRFILESSFPPQGDQPEAIRLLVNGLAAGEYFQTLLGVTGSGKTFTMANVIAITHRPA
IIMAPNKTLAAQLYAEMRAFFPHNAVEYFVSYYDYYQPEAYVPSSDTFIEKDAAINDHIE
QMRLSATKALLERPDVIIVATVSAIYGLGDPASYHGMILHLRESSTMDQRAILKRLAEMQ
YSRNPLEMKRGTFRVNGDVIDIWPAESEDEAVRIELFGDELERISLFDPLTGKTITRLPR
YTIYPKSHYVTPRETILAALDAIKDELRARLEDLRRANKLVEAQRLEQRTRFDLEMMAEL
GYCSGIENYSRYLSGRVPGQAPPTLMDYLPKDALLFMDESHVTVPQFGGMYKGDRSRKET
LVEYGFRLPSALDNRPLTFPEFESLMPQTVFISATPGPYELEHSGQVVEQVVRPTGLVDP
AVDIRPAKGQVDDLISEINIVVRNGWRILVTTLTKRMAEDLTDYLHELGIKCRYLHSDIE
TVERVEIIRDLRAGVFDVLIGINLLREGLDMPEVALVAILDADKEGFLRSERSLIQTIGR
AARNLHGRAILYADSITKSMARAIAETDRRREKQLQFNAAHGITPRGIVKPVSDMIEGVY
RRNVQPAAHAAEKNADYRVLRDPQAVAKKIKELEEAMYRHARNLEFEQAAALRDDIKKLE
TRLLGTDLPVSLEED
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggacaagcgctttatcctggagagcagtttcccgccgcagggcgaccagccggaggct
atccgtctgttggtgaacggcctcgccgctggtgaatatttccagaccctgttgggggtg
accggttcgggcaagaccttcaccatggccaacgtcatcgccatcactcaccggcccgcc
atcatcatggcgcccaacaagaccctggcagcgcagctctatgcggaaatgcgcgcgttc
tttcctcacaatgccgtggagtatttcgtcagttattacgattactaccagccggaggcc
tacgttccttcctccgacaccttcattgaaaaggacgccgctatcaatgatcacatcgag
cagatgcgcctctccgccaccaaggccttgctggaacggccggatgtcatcattgtggcc
accgtttcggcgatctacggcctgggtgatcccgcctcctaccatggcatgattctgcat
ctgcgcgaatcctccaccatggatcagcgcgccatcctcaagcgtctggcggagatgcaa
tacagccgtaatcctttggaaatgaagcggggtacctttcgcgtcaacggcgatgtcatc
gatatatggcccgcggaaagtgaggacgaagccgttcggatcgagctttttggcgacgaa
ctggagcgcatctcgctcttcgatcccctgaccggcaagaccatcacccgtttgccgcgc
tacaccatctaccccaaaagccactacgtcaccccgcgcgagaccattctcgcggcgctg
gacgctatcaaagatgagcttcgcgcgcgtctggaggacctgcgccgcgccaacaagctg
gtcgaggcgcaacgactggagcagcgcacccgctttgatctggagatgatggccgagctg
gggtattgctcggggatcgagaattactcccgctacctctcgggacgagtgcccggtcag
gcaccgccgaccctgatggactacctccccaaggatgccctgctattcatggacgaatcc
catgtcacggtcccacagttcggggggatgtacaagggcgaccgttcgcgcaaggaaacg
ctggtggaatacgggttccggttaccctcggcgctggacaaccggcccttgacgtttccc
gagttcgagtcgctgatgccgcagaccgtgtttatttccgccacgcccggtccctacgaa
ctggagcactccgggcaggtggtggagcaggtggtgcggcccaccggcctggtcgatccc
gctgtggatattcgtccggcgaaagggcaggtcgatgatctgatcagtgaaatcaacatc
gttgtacgtaacggttggcgcattctggtgacgacgctgaccaagcggatggccgaagat
ctgaccgattatctgcatgagctaggcattaaatgccgttatctgcactctgatatcgaa
acggtggagcgggtggagatcattcgcgatctgcgcgccggggtgttcgacgtgctgatc
gggattaacctgttgcgggaaggcctggatatgccggaggtggcattggtcgccattctg
gatgcggataaggagggcttcctgcgctcggagcggtccctgattcagaccatcgggcgc
gccgcgcgtaatttgcatggacgggccattctctatgcggacagcatcaccaaatccatg
gctcgggccatagccgaaaccgaccgccgccgggaaaagcagttgcagttcaatgcagcg
cacggcatcaccccgcgcggcatcgtcaagccggtatcggacatgattgagggggtctat
cgccgcaatgtacaacctgccgcgcatgccgcggaaaaaaatgcggattatcgtgtgctc
cgtgatccccaagccgttgccaagaaaatcaaggaactggaggaagcgatgtaccgacac
gcccgcaacctggagtttgagcaggcagcggcgctgcgggacgacatcaaaaaactggaa
acccgccttctgggaaccgacctgccggtatctctggaggaggactga
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