Acidithiobacillus ferrooxidans ATCC 23270: AFE_0914
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Entry
AFE_0914 CDS
T00810
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
afr
Acidithiobacillus ferrooxidans ATCC 23270
Brite
KEGG Orthology (KO) [BR:
afr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afr03032
]
AFE_0914 (hup)
03036 Chromosome and associated proteins [BR:
afr03036
]
AFE_0914 (hup)
03400 DNA repair and recombination proteins [BR:
afr03400
]
AFE_0914 (hup)
DNA replication proteins [BR:
afr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AFE_0914 (hup)
Chromosome and associated proteins [BR:
afr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AFE_0914 (hup)
DNA repair and recombination proteins [BR:
afr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AFE_0914 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Barstar
HU-DNA_bdg
DUF2267
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
ACK79339
UniProt:
B7J794
LinkDB
All DBs
Position
830639..830911
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIEKIAEEAGVTRAAAGHTLDALVKVVTDALKAGDQVTLVGFGSFLVSSREARKG
RNPATGAEIMIAASRTPKFKAGKALRDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatcggagttgatcgagaagattgcagaagaagctggcgtgacccgtgccgcc
gccggccatactctggatgcgcttgtcaaggtggttactgacgcgctcaaggctggtgat
caggtaactctggtcggtttcggttcatttcttgtttccagccgtgaggcgcgcaaaggc
cgtaatcccgctaccggcgcggaaatcatgatcgccgcaagtcgcacgcctaaatttaag
gctggtaaagcgttgcgtgatgcagtaaactag
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