Acidithiobacillus ferrooxidans ATCC 23270: AFE_0942
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Entry
AFE_0942 CDS
T00810
Name
(GenBank) DNA helicase, SNF2/RAD54 family
Organism
afr
Acidithiobacillus ferrooxidans ATCC 23270
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWIM
DUF3253
Motif
Other DBs
NCBI-ProteinID:
ACK80166
UniProt:
B7J7B9
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Position
complement(857210..860551)
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AA seq
1113 aa
AA seq
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MPTNNDWMNWHRDASAMPTLGTYGYEDIRKWVGDLEIRKAQPYQKSISHLEQRGSTDLSA
LVQGTAHTPYRVDIHLSQGHLVTLCTCPVGSRCKHVTAVLLALLAGRSHAAPTPAPALRP
HVMQWLSELRSHLDPPKPKPPTATHTLYWLLELNSRRHQGPVLSCRKARLNKSGECTGLT
PWYNFEGAQRRPPSFIDDADQRALRRLLLEDPYASQTGEFDLGPRHGAAALTILAGTGRL
FANSPANPSLRLGDHRPGTLVWKVSKGGEQYPALETTPPATSFLPLDATWYLDGKTGEIG
PIETDLPTTVLRDLLQAPPLNAQEAILLREMLEQSVPGLPAPVADPGQGLREIEAPLQAL
LWCDTLALLGIQAHRNYAGQWSPTCRFDYAQPTFVYGPARIAVDDDSAIQTLNNGEMVRI
KRDRTAEKQALQALGKTGLKAVSAGLFHSLSPLPHPIYGLASEADWDGFMSTSVETLREQ
GWEVRWPDGFRHYFLQVDEWDMQVDGAEEGWLGLDVGIVVDGKRLALPPLLGALFARDPR
WLNPGGLGTIPDGEHIHLHTPAGVPIQTTADRLKPLVGTLIDLFSLDAGGPLRMSAFDAP
RIARLVDGNQWRSEGMDAVRALARSLPQNGEIPSVPLPAGFALPLRSYQQDGLAWLQFLR
EHHLGGILADDMGLGKTAQTLAHLLLEKESGRLTDPALIIMPTSLIHNWREEAARFTPDL
RVLSLHGKERSSRFAQIPDHDLILTTYPLIWRDVETLRNQHFHLLILDEAQMVKNARGRA
AEAIREIPTRHRLALTGTPLENHLGELWAQFDFFLPGFLGDQRSFQRVWRGPIERHGDAE
RLDLLARRVRPFILRRRKEDVAKELPEKTIIIRPMDIEGAQRDLYETVRSAMDERIRQEI
AAKGFQRSQIVILDAMLKLRQVCCDPRLLKSEKARKVQDSAKLALLMEMIPELLAEGRQI
LLFSQFTEMLALISARLDKMHIPYVLLTGSTQDRKTPIDRFQRGEVPLFLISLKAGGVGL
NLTAADTVIHYDPWWNPAAENQATDRAHRIGQKRQVFVYKLIVAGSIEEKILALQEKKAI
LAAGVLEKTQKEKLRFGPDDLASLLAPLPEVLR
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccaataatgactggatgaactggcaccgcgatgccagtgcaatgcccacgctg
gggacgtacggttacgaagatatccgcaaatgggtgggcgatctggaaattcgcaaagcc
caaccttaccagaagtccatcagccatctggagcagcgtggcagcaccgacctcagtgcc
ctggtgcagggcacggcacatacgccataccgggtagacatccacctcagccaagggcat
ctggtaaccctgtgtacctgcccggtaggcagtcgctgcaaacacgtcaccgcggtgctc
ctcgctctgctggccggtcgtagccacgctgcgccgacgccggccccggctttgcgtccg
catgtgatgcaatggctgagcgaactgcgttcgcatctggatccgcccaaacccaagccg
ccgactgccactcataccctgtactggctgctggaactgaacagccgacgtcatcagggg
ccggttctcagttgtcgtaaggcccgcctgaacaaaagcggagaatgtaccggtctcacc
ccctggtacaattttgaaggcgcccagcgccgcccgccgagcttcatcgacgacgcggac
cagcgtgctctgcgccgtctgctgctggaagacccctatgccagccagacgggcgaattc
gatctcggcccccgccacggtgccgcagctctcaccatactcgccggtaccggacgcctc
ttcgccaattcgccagccaacccgtccctgcgactcggtgatcaccggcctggcacactg
gtctggaaggtcagcaagggcggggaacaatatccggcactggaaaccacgccacccgct
accagcttcctgcccctggatgcgacctggtacctggatgggaagactggggaaatcggc
ccgatcgagacggacctgccgaccacggtcctgcgcgatctgctgcaagccccgcccctc
aatgcgcaagaagccattcttttgcgcgagatgctggagcaatcggtgcccggtctcccc
gcgcccgtggccgatcccggacagggcttacgggaaatcgaagcgcctctgcaagccctg
ctctggtgcgacactctggccctcctcggtattcaggcacaccgcaactatgccggccaa
tggagtcctacctgtcgcttcgattatgcgcagcccacatttgtgtatggtcccgcacgc
attgccgtggacgacgacagtgccatccagaccctcaacaatggtgagatggttcggata
aaacgcgacaggacagccgaaaaacaggcactgcaggcactcggaaaaacaggtctgaaa
gctgtcagtgccggccttttccacagtctgtcgccgctgcctcatcccatctacgggcta
gccagcgaagccgactgggacgggttcatgtcaacgagcgtcgagaccctccgcgagcag
ggttgggaggtgcgctggcccgatggctttcgtcactacttcctacaggtggatgaatgg
gatatgcaggtagatggtgccgaggaggggtggctgggtctcgatgtcggtatcgtggtg
gacggcaagcggctggcgctgccccccctgctcggcgccctcttcgcccgcgacccgcgc
tggctgaatccaggcggtctcggtaccattcccgatggtgagcatatccacctgcacacc
ccggcgggcgtgccgatccagaccacggcggatcgcctgaaacctctggtcggaaccctc
atcgatctgttcagcctggacgccggggggcctttgcggatgtccgcctttgacgcgccc
cgcatcgcccggctggtggacggcaaccagtggcgtagtgaagggatggatgccgtgcgt
gctctggctagatctttgcctcaaaacggagagatcccctccgtcccactgcccgcaggt
tttgccctccccctgcgcagctatcaacaggatgggcttgcctggctgcaattcctgcgc
gagcatcatttgggcggcattctcgcggacgatatgggtctcggcaaaaccgcccagacc
ctcgcccatctgctgctggaaaaagaaagtggccgcctcacggatcccgccctgatcatc
atgcccacctctctgattcacaactggcgagaagaggcggcacgcttcactcccgacctg
cgggtgctctccctgcacggcaaagagcgcagcagccgtttcgcccagatacctgaccat
gacctgattcttaccacctatccgctgatctggcgggacgtcgaaacgctcagaaatcag
cactttcatctgctgattctcgatgaggcacagatggtcaagaacgcgcggggccgcgcc
gccgaagccatccgtgagattcctacccggcatcggcttgccctcaccggcacccccctt
gaaaatcatctcggcgaactctgggcacaattcgacttcttcctgcccggctttctcggc
gaccagcgcagtttccaacgggtctggcgcggccccatcgagcgccacggagatgctgag
cgtctggatttgttggcccgtcgggtgcgccccttcattctgcgtcggcgcaaggaggat
gtcgccaaggaactccccgagaagaccatcattatccgccccatggatatcgaaggggcg
cagcgcgatctttatgaaacggtacgcagcgccatggatgaacggatccgccaggaaatc
gccgccaagggttttcagcgcagccagatcgtcatcctggacgcgatgctcaaactccgc
caagtctgctgtgacccgcgcctgctcaagagtgaaaaggcgcgaaaggtacaggacagc
gccaaactcgccctgctcatggagatgattccggagttgctggcggaaggtcgccagatt
ctgctgttttcgcaattcaccgagatgctcgccctgatcagtgcacgcctcgacaagatg
catatcccttacgtgctgctcactggcagcacccaggatcgcaagacgcccatcgaccgc
tttcagcgcggtgaagtgccactcttcctgatcagcctcaaggcgggcggcgtcggcctc
aacctcacggcggcagacaccgtgattcactatgacccgtggtggaaccccgccgccgaa
aatcaggccactgatcgcgcccaccgcatcggccagaaacgtcaggtttttgtttacaag
ctgattgttgccgggagcattgaagaaaaaatcctggccctgcaggagaaaaaggccatt
ctcgccgcaggtgtgctggagaaaacgcaaaaagaaaagctccgtttcggccccgacgac
ctggcctccctgctcgcgccgctaccggaagtcttgcgctga
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