Acidithiobacillus ferrooxidans ATCC 23270: AFE_1775
Help
Entry
AFE_1775 CDS
T00810
Symbol
pcnB
Name
(GenBank) polyA polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
afr
Acidithiobacillus ferrooxidans ATCC 23270
Pathway
afr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AFE_1775 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afr03019
]
AFE_1775 (pcnB)
Enzymes [BR:
afr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
AFE_1775 (pcnB)
Messenger RNA biogenesis [BR:
afr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AFE_1775 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF6932
Motif
Other DBs
NCBI-ProteinID:
ACK80249
UniProt:
B7JBN1
LinkDB
All DBs
Position
complement(1538056..1539489)
Genome browser
AA seq
477 aa
AA seq
DB search
MAAAPSSLSSGIPGARVTPRSQHNVSRLQISDSALQVLNGLHRAGFQAYLVGGSVRDLLL
GREPKDFDVATDAHPEQVRKLFRRNARLIGRRFILVHVQFGNEIIEVATFRGSANGKEDE
SSEHSETGRILADNVYGSLEEDARRRDFTANALYYNIADRSILDFSTGMEDLQAGRLRVI
GDPEQRYREDPVRMLRAVRFAAKLGFTLDAAAQAPIAACRKLLQEVPSARLFEETLKLFL
TGNAQTSFEHLRQMGLFAALFPQVDALLDDARYGSARILLQGALQGTDARLLDGKSVTPA
FLFAALLWPALQQERQLLEQQGKPETVALQQAASGVLQECAGRISVPRRFALPMREIWDL
QARFMRRGGRRPHALLAHPRFRAAFDFLNLRSQSGEIPATLVEWWEQFQTADHDGRRALI
ERARLEETGQEPALGPLPATSRRRPRRRRRSNHAKQGETSQPGGSDDGHDDGRAGND
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgccctcatcgttatcgtccggcatccccggtgcgcgggtcacaccgcgc
agtcagcacaacgtatcccggctgcagatcagcgacagcgccctgcaagtgctcaatggc
ctgcaccgtgccggctttcaggcctatctggtgggcggcagtgtccgcgatctgctgctc
ggacgagagcccaaggatttcgacgtcgcaacagatgcgcacccggaacaggtccgcaag
ttatttcgccgcaatgcccggctgatcggccgacggttcattctggtccatgtgcagttt
ggcaacgagatcatagaagtggccaccttccgcggcagtgcgaacggcaaggaagacgaa
tccagcgagcacagcgaaacgggacgcatactggcagacaacgtctacggctctctggaa
gaggacgcgcggcgcagggatttcaccgccaacgcgctctattataatattgccgaccgc
agcattctggatttctccaccggcatggaagatttgcaggccggccgactgcgcgtcatc
ggtgatccggaacagcgctaccgggaagaccctgtgcggatgctgcgggcggtccgtttt
gccgcgaagcttgggttcactctggatgctgccgcccaggcaccgatagctgcctgccgg
aaactcctgcaggaagtgccctcggcgcggttgtttgaggaaacgctgaagcttttcctg
accggcaatgcgcagaccagctttgagcacctgcgccagatgggattgtttgcggccctg
tttccacaggtggatgcgcttctggacgacgcacgatacggctccgcccgcatcctcctg
caaggtgcgttgcagggcaccgatgcgcggctgctcgacggtaaatcggtgacgcccgcg
tttctctttgccgcgctgctctggcctgccctgcagcaggaacgacagttgctggaacaa
caggggaagcccgagacagttgccctgcagcaggccgccagcggcgttctgcaggagtgc
gcggggcggatctctgttccccgccgcttcgccctgcccatgcgtgaaatctgggactta
caggcgcgtttcatgcgccgtggcgggcgtcgcccccatgcgctgctagcccacccgcgt
ttccgcgccgccttcgatttcctgaacctgcgcagccagagcggagaaataccagctact
ttggtagaatggtgggaacaattccagaccgcggatcatgatggccggcgcgccctgatc
gaacgtgcccgcctcgaagaaacgggacaggaacccgcgctgggaccacttccggcaact
tcgcggcgccgccctcggcggcgacggcgcagcaatcatgcgaaacagggcgaaacctcc
cagccgggcggctcggacgacggccatgacgacggacgagccggcaacgattga
DBGET
integrated database retrieval system
