Acidithiobacillus ferrooxidans ATCC 23270: AFE_1848
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Entry
AFE_1848 CDS
T00810
Name
(GenBank) base excision repair protein, HhH-GPD family
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
afr
Acidithiobacillus ferrooxidans ATCC 23270
Pathway
afr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
afr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AFE_1848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afr03400
]
AFE_1848
Enzymes [BR:
afr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AFE_1848
DNA repair and recombination proteins [BR:
afr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AFE_1848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
ACK79408
UniProt:
B7JBV2
LinkDB
All DBs
Position
complement(1605780..1606748)
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AA seq
322 aa
AA seq
DB search
MGYYFRLSPRPPFRLDLTVWALRRQAHNRMDGWESETYRRVWRYGDDWLKVRLWQTKGDP
DPFLEGEIYEGPQDERTVSWVRAQLTWMLSLDRDLGPFYVVAAGDPRLASLEARYRGLRP
PRFPSLFEGMVNAVACQQLSLHLGITLLNRLSELCREGVGEMDQVYPFPDPGSLLRQEVT
ALRGLGFSGQKVTALRALAEEAAVGGLEREDWQHLPNAAAVQRLLRLRGIGRWSAEYVLL
RTLGRLDVFPGDDVGARKALARWLEENGSLDYAQVAHRLRPWQPYAGMVYFLLLMRRLEG
EGRMWNPGDELPLSQSDQADRR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgggatactacttccgcctcagcccgcgaccgccctttcgtttggatctcacggtctgg
gcgctgcgccgtcaagcccataacaggatggatggctgggagagcgaaacctatcggcgc
gtctggcgctatggggacgactggctgaaagtccggctctggcagacgaagggcgatccc
gatccgtttctggaaggagaaatctacgaaggcccccaggacgagcggaccgtctcctgg
gtccgcgcgcaactcacctggatgctaagcctggatcgggatcttggccccttttacgtg
gtagccgctggagatcctcgtctcgcgtccttggaggcgcgctaccgaggcctccgacca
ccccgtttcccatccctcttcgagggcatggtcaatgccgtcgcctgccagcaactgagt
ctgcatctgggtatcactctcctcaaccgactctcggagctctgcagggagggggtggga
gaaatggaccaggtgtacccttttccggatcctggctctctgctgcggcaggaggtgacg
gccctgcgtggtctaggcttcagcggccagaaggtgaccgccttgcgcgcgctggcggaa
gaagcggcggtcggcggactggagcgtgaagactggcagcatttgcccaacgccgcagcc
gtgcagcgtctgctgcgtttgcgcggcatcggccgctggtcggcggagtacgtcctgctg
cgcaccctggggcgtctggacgttttccccggtgacgacgtgggggcgcgcaaggccctg
gcccgctggctggaggaaaacggcagcttggattatgcccaggtcgcccaccggctccgg
ccatggcagccctacgccggcatggtatattttctgttgttgatgcggcgactggaaggc
gagggccgtatgtggaaccccggcgatgaactgccgctgtcccaatcggatcaggcggac
aggcggtaa
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