Acidithiobacillus ferrooxidans ATCC 23270: AFE_1919
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Entry
AFE_1919 CDS
T00810
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
afr
Acidithiobacillus ferrooxidans ATCC 23270
Pathway
afr03030
DNA replication
afr03430
Mismatch repair
afr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AFE_1919 (dnaX)
03430 Mismatch repair
AFE_1919 (dnaX)
03440 Homologous recombination
AFE_1919 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afr03032
]
AFE_1919 (dnaX)
03400 DNA repair and recombination proteins [BR:
afr03400
]
AFE_1919 (dnaX)
Enzymes [BR:
afr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AFE_1919 (dnaX)
DNA replication proteins [BR:
afr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AFE_1919 (dnaX)
DNA repair and recombination proteins [BR:
afr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AFE_1919 (dnaX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_30
AAA_19
AAA_14
AAA_18
AAA_2
nSTAND3
TsaE
Mg_chelatase
AAA_assoc_2
AAA_28
FhuF
RCF1-5-like_lid
PIF1
DNA_pol3_tau_5
zf-CXXC
SKI
Motif
Other DBs
NCBI-ProteinID:
ACK79172
UniProt:
B7JC16
LinkDB
All DBs
Position
1671047..1672765
Genome browser
AA seq
572 aa
AA seq
DB search
MSAYLALARRWRPQHFDDFVGQEAVVSALRHALDSGRIHHAFLFTGTRGVGKTTLARLLA
KCLNCERGVSSNPCGECSACRSIAAGNFVDLLEVDAASRTRVDETRDLLDNVQYAPTAGR
YKAYLIDEVHMLSAHSFNALLKTLEEPPEHVKFLLATTDPQKLPITVLSRCLQFNLRRLD
VPQIQGRLRQIMSLEQVPAEDAALQILSRAADGSLRDALSLLDQAIVHGGGAVRRDGVLA
MLGRSGDDAVLGLIAALVDRDAAQVFAIVGDHLARGMDGPGLLDLVIEGLHRIALAQFLP
ADPDDDGAEAVVHLRGRISPLTLQSWYFLLLSARRDFALYPDDRMALEMAFLRVLSFSGS
ASPDSPPAALPGGENRHPGESLPPTREFVMPEATSPLSDHSVPLLSIRSRDEVREPSPVA
TSGQRDADAGTAPAADWRRVLASLAVSPMIAEYLRYGQALRCDPEAVELAVEPNYLPFLL
KTEARRALHQALTAYYGREPRLSIVALTIETGVGSLVQEDRAQLASRQAAAEARVAADPR
IGAFLEALDARVESIEIVAASSNDMPSAHNET
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcctatctcgcgctggcccgccgctggcgaccccaacattttgacgattttgtc
gggcaggaggccgtcgtctccgccttgcgccatgccctggattccggccgcatccatcat
gcttttctgttcaccggcacacggggcgtcggcaagacgactctggcgcggctgctcgcc
aagtgtctgaactgcgagcgaggcgtgagcagcaacccctgcggagagtgcagcgcctgc
cgcagtattgctgcagggaacttcgtggatctgctggaggtggacgcggcaagccgtacc
cgggtggatgagacccgcgaccttctggacaatgtccagtatgcgcctacggctggtcgc
tacaaggcgtacctcattgacgaggtgcatatgttatctgcgcacagcttcaatgcgctg
ctgaaaaccttggaagaaccgccggaacatgtcaaatttctgctggcgactacggaccca
cagaagctgccgataaccgtgctctcccgctgcctgcagtttaatttacgtcgcctggat
gttccccagattcagggaagattgcggcagatcatgtcgttggaacaggtgccggcggag
gacgccgccctgcagatactatcgcgcgctgccgacgggagtctgcgtgacgccttgagt
ctgctggatcaggctattgtccacggtggtggcgcggtgcggcgcgacggcgtgctcgcg
atgctggggcgcagcggcgatgacgcggtgctgggtctgatcgccgcgctggtggaccga
gatgctgcacaggtattcgccatagtgggtgatcatctggcgcggggcatggacgggccc
ggcctgctggacctggtcatagaaggcctgcatcgcatcgctctggcgcaatttcttcca
gccgatccggatgacgatggcgccgaggcggtcgtgcatctgcgcgggagaatcagcccg
cttaccctgcagtcctggtattttttgctcctttcggcacgacgtgactttgcgctttat
ccagatgatcgcatggcgctggagatggcctttctgcgggtgttgagcttttccggttca
gcatcgcccgactcgccgccagcggccctcccgggcggggaaaaccggcatcctggcgag
tcacttcccccgacgcgcgaattcgttatgcccgaggcaacttcaccgctatcggatcat
tcggttcccctgctctccatccgttcacgggatgaagtccgggagccgtcgccggtagcg
acgtccggtcagcgcgatgcggatgccgggaccgcgccagcagcagactggcgtcgcgta
ctggcatcgctggcggtgtcgccgatgattgccgagtacctgcgctacggacaagccctg
cgctgcgatccggaggcggtggagttggccgtggagcccaattatttgccgttccttctc
aagaccgaggcccgccgggcgttacatcaggcgcttacggcatattacggccgggagccc
aggctcagcattgttgctctcaccatagagaccggggtgggcagcctggtgcaggaagac
cgggcgcagctggcgtcccggcaagctgcagcagaggcacgtgtggccgcggatccgcgc
atcggcgcgttcctcgaagccctggatgcccgcgtagaatccattgaaatcgtggcggca
tcctcaaacgatatgccgtcagctcacaatgaaacgtaa
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