Acidithiobacillus ferrooxidans ATCC 23270: AFE_2471
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Entry
AFE_2471 CDS
T00810
Name
(GenBank) DNA-binding protein HU family protein
KO
K03530
DNA-binding protein HU-beta
Organism
afr
Acidithiobacillus ferrooxidans ATCC 23270
Brite
KEGG Orthology (KO) [BR:
afr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afr03032
]
AFE_2471
03036 Chromosome and associated proteins [BR:
afr03036
]
AFE_2471
03400 DNA repair and recombination proteins [BR:
afr03400
]
AFE_2471
DNA replication proteins [BR:
afr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AFE_2471
Chromosome and associated proteins [BR:
afr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AFE_2471
DNA repair and recombination proteins [BR:
afr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AFE_2471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
Motif
Other DBs
NCBI-ProteinID:
ACK79350
UniProt:
B7J708
LinkDB
All DBs
Position
complement(2203665..2204243)
Genome browser
AA seq
192 aa
AA seq
DB search
MCRVCLPGKVFCWFFERTDGRSFLPPAQALKQASVLTPQGTTHVTINALRRNHCYIDDDF
LCPGGALPLVDSGIFRIVPRNVHLWISGRHLAFRCGRVCMVPAGVTQMVSTLCPEDVIWS
YAARFLEAFARTIRAEMHSAEKILIPEVDTLHFTNRSARKGRNLATGEKIQIPARRVVTF
KATKTFQDRVNS
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
gtgtgccgagtctgtctgccaggaaaagtgttttgctggttttttgaaaggacagatgga
cgctcttttttacctcctgcgcaggctcttaaacaggcatcagttctcaccccgcaagga
accacccatgtcaccattaacgctcttcggcgtaatcactgttacattgatgatgatttt
ttatgccctggaggcgcgctccctttggtggactctggcattttccgtatcgtgcctcgg
aacgtccatttatggatttctggccggcacttggcctttcggtgtggtcgagtttgtatg
gtgcctgctggcgttacgcaaatggtatctactttatgccccgaagacgtaatatggtca
tatgcggcgcggttcctggaagcctttgccaggaccattcgcgccgaaatgcactcggcg
gaaaagatactcatcccggaagtcgatacgctccatttcaccaacagatcagcgaggaaa
ggccggaatcttgcgacgggtgagaaaatccagatcccagcacgacgcgtcgtgaccttc
aaggccacgaagacgtttcaggacagggtaaactcctag
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