Acidithiobacillus ferrooxidans ATCC 23270: AFE_2758
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Entry
AFE_2758 CDS
T00810
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
afr
Acidithiobacillus ferrooxidans ATCC 23270
Pathway
afr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
afr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AFE_2758 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afr03400
]
AFE_2758 (mutM)
Enzymes [BR:
afr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AFE_2758 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AFE_2758 (mutM)
DNA repair and recombination proteins [BR:
afr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AFE_2758 (mutM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF7351
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
ACK78008
UniProt:
B7J8I7
LinkDB
All DBs
Position
complement(2453559..2454371)
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVEVTRLGIAPHLRGRRLEGAVVRDSRLRLPVNDDLAARVSGQRLLNLRRRGKYL
LLDLERGTILIHLGMSGHLRVLPQSAPVQKHDHVDLLFADDLCLRFHDPRRFGAVLWLDD
ADHHPLLQHLGPEPLGDVFGAEYLYQRGRNRQIPVKSFLMDAHIVVGVGNIYANESLFAA
GIDPRRPAGRIALPRYMKLVQAVRTVLEAAIAQGGTTLRDFTRPDGGNGYFRLSLAVYGR
EGEPCTHCGAPLQGVRIGGRATIYCSQCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagttgcccgaggtcgaagtcacccgtctgggtatcgctccccatctgcgggga
cggcgcctggagggggccgtggtgcgggacagccgcctgcgactgcccgtgaatgacgac
cttgcggcgcgggtgagcgggcagcgtctgctgaacctgcggcggcggggcaagtacttg
ctgctcgatctggaacggggaacgatcctgatccatctgggaatgagcgggcacctgcgc
gtcctcccccaaagcgcccccgtgcagaagcacgatcatgtcgatctgctgtttgcggac
gatctctgtctgcgctttcatgacccgcgccggtttggagccgtactctggcttgacgat
gccgaccaccatccccttctgcagcatctcgggccggaacccctgggcgatgtcttcggc
gcggagtacctttaccagcggggccgaaatcggcagataccggtcaaatccttcctcatg
gatgcccatatcgttgtgggcgtcggtaatatttacgccaatgaatcgctgtttgcggcg
ggtatcgatccacgccgtcctgcgggacggatcgccctgccgcgttacatgaaactggtg
caggcggtgcgcaccgtcctggaggccgccattgcccagggtggaacgaccttgcgtgat
tttacccgaccggatggcgggaatggatattttcgactatctctggcggtgtatggacga
gagggggagccttgtacacattgtggtgcgccgttacagggcgtccgcatcgggggccgg
gcgacgatctattgttcccaatgtcagcgctga
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