Acidithiobacillus ferrooxidans ATCC 23270: AFE_2799
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Entry
AFE_2799 CDS
T00810
Name
(GenBank) transcriptional regulator, Ada family/DNA-3-methyladenine glycosylase II
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
afr
Acidithiobacillus ferrooxidans ATCC 23270
Pathway
afr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
afr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AFE_2799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afr03000
]
AFE_2799
03400 DNA repair and recombination proteins [BR:
afr03400
]
AFE_2799
Enzymes [BR:
afr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AFE_2799
Transcription factors [BR:
afr03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AFE_2799
DNA repair and recombination proteins [BR:
afr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AFE_2799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
ACK78479
UniProt:
B7J8M4
LinkDB
All DBs
Position
complement(2490478..2491968)
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AA seq
496 aa
AA seq
DB search
MNQQVLDREACYRALLTRDARFDGQFYTAVLSTGIYCRPICPARPPKIENCLFLPSAAAA
HQMGFRPCLRCRPEVNPAKQRTWAGSNLVDHALRWITEGAFDDDCVEHLAERLGVSGRHL
RRLFARELGTTPIAVAQAQRVLLAKKMIVETTLSMTDVAIAAGFGSVRRFNDAIQRNYGR
APKTMRHTSTSNGNMTAGITLKLPFTPPYDWEAMIDFLAGRAIPGVEAVDAGKYARSFQW
DGMHGVVEVQQESETNHLLATIYATEVPPIGMIVARLRRLFDLDANIGMIDAHLSADPRL
AARVRERPGLRVPGSWDLFELTVRAVLGQQISVAAATTLSGRLVATLGEPIKGDFGAALE
KTGISMIFPLPAAVMTANLTPIGLTRAREKALQSLATAVHEDRLFFQPQPSPNKTIEKLC
ELPGIGPWTAHYIAMRGYRDPDAFPHSDLGLLRALETKNGRPTPAELLALAEAWRPWRAY
GAMRLWVQPKILPAAR
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaacaggtactcgaccgtgaagcttgctatcgcgcccttcttacccgcgatgca
cggtttgacggccagttctacacggcggttctctccacggggatctattgccgtccgatt
tgccctgcgcgaccgccgaagatcgaaaattgcctctttcttcccagcgcggcggcagcc
catcagatgggattcaggccatgtttgcggtgccgccccgaggtaaatccggccaagcaa
cgcacctgggctggttccaacctggttgaccatgccttgcggtggatcactgagggcgcc
ttcgacgatgactgcgtggaacatttggctgagcgattgggagtcagcggacgacatctc
cgacggctattcgcccgcgagctcggcaccacgccgatagccgtagcacaggcccagcgt
gtccttctggcgaaaaaaatgattgtggaaacaacgctgtcgatgacggatgttgccatc
gccgctggcttcggtagtgtccgccgattcaacgatgccatacaacgaaactatggaagg
gctccgaaaacaatgcggcacacctcgacatcaaacggcaacatgactgcgggcatcacg
ctgaagcttccgttcacccctccctatgactgggaggccatgatcgattttctcgccgga
agggccatccccggggtagaagccgtggacgccgggaaatatgcccgctcatttcaatgg
gatggcatgcacggcgttgtcgaagtccagcaggagtcggaaaccaatcatcttttagcc
actatttatgccactgaagttccccccataggtatgattgtcgcaagactccgccgcttg
tttgatctggatgccaatatcgggatgattgatgcgcatctttccgcagacccacgcctg
gcagcgcgggtgagggaaagacccgggctcagggtacctggcagttgggatctctttgaa
ctaacggtccgggcagtattgggccaacaaatcagcgtcgctgcggccaccacgctgtcc
ggtcgcctcgttgcgacccttggagaacccatcaagggagatttcggagcggctttggaa
aaaaccggcatctccatgattttcccgttacccgccgctgtcatgactgccaacctgacc
cctattggattaactcgcgcgcgggaaaaggctttgcagtccctcgctacagccgtgcat
gaggatcggcttttctttcagcctcaaccatcacccaataaaaccatagaaaaactctgt
gagctgcccggtatcggcccatggacggctcactatatcgccatgcgcggataccgcgac
ccggacgcattcccgcattcggacttggggttgctgcgtgccctggaaacaaagaacggc
cgccctacccccgctgaactgctggccctcgccgaggcatggaggccctggcgcgcctat
ggggctatgcgattgtgggttcaaccgaagatattgccggccgcacgctga
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