Acidithiobacillus ferrooxidans ATCC 23270: AFE_2856
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Entry
AFE_2856 CDS
T00810
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
afr
Acidithiobacillus ferrooxidans ATCC 23270
Pathway
afr02024
Quorum sensing
afr03060
Protein export
afr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
afr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
AFE_2856 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
AFE_2856 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AFE_2856 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
afr02044
]
AFE_2856 (ffh)
Enzymes [BR:
afr01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
AFE_2856 (ffh)
Secretion system [BR:
afr02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
AFE_2856 (ffh)
Eukaryotic Sec-SRP protein
AFE_2856 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
Zeta_toxin
ArsA_ATPase
cobW
AAA_31
AAA_33
nSTAND3
DUF2927
AAA_24
ATPase
APS_kinase
ResIII
AAA_18
YqeC
ParA
SWI2_SNF2
KTI12
DnaB_C
T2SSE
Thymidylate_kin
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ACK78003
UniProt:
B7J949
LinkDB
All DBs
Position
complement(2540330..2541706)
Genome browser
AA seq
458 aa
AA seq
DB search
MFDNLTQKLTQTFKNLRGQGRLSEDNIRDALRDVRLALLEADVALPVVKDFINNVRESAM
GEAVVKSLTPGQVFVKIVHDELVQLMGAHNDSLDLSARPPAVILLAGLQGSGKTTTSAKL
ALWLKDKEKKRVLMVSTDVYRPAAMEQLVHLGKDIEVDVFPSSPGQQPVRIAQDAVEAAQ
RGVYDVLIVDTAGRLHVDGEMMAEAQALTAAVKPVELLFVVDAMTGQDAVNTAKAFNDAL
PLTGVILTKADGDARGGAALSVRAITGKPIKFIGIGEKIRKGLEPFYPERMASRILGMGD
IVSLVEQVQQDVDEDQARKMTQKLRSGKGFDLEDFREQLRQLERMGGMASIMDKLPGMGE
LSAEAQSAMQDGKPMRRLEAIINSMTPGERHHPDIIKASRRRRIAAGSGTTVTEVNKLLK
QFEMMQKMFKKMGKGGRGLSRLLGMNPKSMLKGGLPFR
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacaatctgacccagaaactgacccagactttcaagaatctgcgcggccaggga
cggctgagcgaggacaacatccgtgacgccctgcgcgacgtgcgcctggcgctgctggag
gcggatgttgccctgccggtggtcaaggactttatcaacaacgtgcgcgaatcggccatg
ggcgaagccgtggtcaaaagcctcacgccggggcaagtcttcgtcaagatcgtccacgac
gaactggtacagttgatgggcgcgcataacgacagtctcgatctcagcgcccgtcccccg
gcggtgattctcctcgcgggtttgcagggttcgggtaagactaccactagtgccaagctc
gccctgtggctcaaggacaaggaaaagaagcgcgtgctgatggtcagtaccgacgtctat
cgtccggccgccatggaacagttggtgcatctgggtaaggacatcgaggtggatgtattt
ccctccagccccggccagcagccggtgcgtatcgcccaggatgcggtggaggcggcgcag
cgcggcgtctatgacgtgctcatcgtcgatacggcggggcgtctgcatgtggacggcgag
atgatggcggaggcacaggcactgacggcggcggtcaagccggtggaactgctctttgtg
gtggatgccatgaccggtcaggacgcggtgaataccgccaaggcctttaatgacgctctg
ccgctgaccggcgtgattctcaccaaggcggacggcgacgcccgcggtggcgcggctcta
tcggtgcgagccattaccggcaagcccatcaagttcatcggtatcggtgagaaaattcgc
aagggtctggaaccgttttatcccgagcgcatggcctcgcgcattctggggatgggtgac
atcgtcagtttggtggagcaggtccagcaggatgtggatgaggatcaggcccggaaaatg
acccagaagttgcgcagcggcaagggcttcgatctggaagacttccgtgagcagttgcgt
cagctcgagcgcatgggcggtatggccagcatcatggacaagctgccgggtatgggtgag
ttgtccgccgaggcgcagagcgcgatgcaggatggcaagcccatgcgccgcctggaagcc
atcatcaactctatgacgcccggcgaaagacatcatccggacatcatcaaggcctcgcga
cggcggcggattgctgcgggttccgggacgaccgtgaccgaagtgaacaagctcctaaag
cagttcgaaatgatgcaaaagatgttcaaaaaaatgggtaaagggggccggggactcagc
cgtttgctggggatgaatcccaaatccatgctgaagggcggtttacccttccgttag
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