Acidithiobacillus ferrooxidans ATCC 23270: AFE_2987
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Entry
AFE_2987 CDS
T00810
Name
(GenBank) peptide ABC transporter, periplasmic peptide-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
afr
Acidithiobacillus ferrooxidans ATCC 23270
Pathway
afr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
afr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AFE_2987
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afr02000
]
AFE_2987
Transporters [BR:
afr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
AFE_2987
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Paralog
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ACK79527
UniProt:
B7J9W0
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All DBs
Position
complement(2674880..2676511)
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AA seq
543 aa
AA seq
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MNRPSRVLSVFSGVVLFSLGLAGSAIAAVSSMTTVTSVGLSPPMNVNSLLPVVNNDSSAN
AQIISLMFRPLLWIGTNLKINWPQSIAKSITVSPNRRKFIIHLKVWRWSDGRPVTAEDTL
ACLTLIRQYGPRYPNAGMGGIPNIIESAVVIDPRTLEITLKRSVNPTWFELNGLSQLFPV
PAWRWKHYSIDTLSKLQDNPAMVSVVDGPYNLQRFVPGRSISFIRNPHYSGNPSALEHLH
FKMYTSDSSAFWALKTGTIQAGMIPHYLYAARSMVKNLKTCVSNGGYGFNYVTLNLTNPQ
VAFFRNVKVRQALALAINQTQIIQIAFHGLGVPSFNPVPTNPDTYLSPEMKKLVARPALA
YNPSAAKQLLAEAGWQPGLDGVRMRNGQRLQFTMMVPDTSQTLIAVAEMLKADWQAVGID
MRLRVLPFNLELAKLHPHGKWDASMIVWSYDPDYYPSGDGLFNTGGGSNYGDYSNSMMDK
LVRDSTEKNSTKFLYQYENYAYAQQPVIFLPYPKYVVKYTQDLTHAQLMEGVYSVDCHPQ
RLH
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgaccttcccgcgttctgtccgttttttctggcgttgtgttgttcagtctcggt
ttggctggcagcgcaattgccgccgtttcgtcgatgactacagtgacatctgtgggcttg
tctccacccatgaatgtcaactctttgctgccggtggtcaataatgattccagtgccaat
gcgcagataatcagcttgatgtttcggcctcttttgtggattggcaccaatctgaaaatc
aactggccgcaatccattgccaaaagtattaccgtatcgccgaaccggcgaaagtttatc
attcatctcaaggtttggcgttggtctgacgggagaccggttacggctgaagatactttg
gcttgtcttacgctgattcgccaatacgggccaagataccccaacgcgggaatgggagga
ataccgaatattatcgaaagcgcagtggttattgatcctcggactctggaaatcacactg
aaacgttcggtgaacccaacctggtttgaactgaatggattgtctcagttgtttccagtg
cccgcctggcgctggaaacactattccatagatacactgtccaaacttcaggataacccg
gctatggtttccgtggtggatggtccatacaacctgcaacgtttcgtccctggtcggagc
atcagctttatacgaaaccctcattattccggaaatccatccgctttggagcacctacat
tttaaaatgtacacctctgattccagtgccttttgggctctgaaaacaggcaccattcag
gcgggaatgattccgcattacttgtatgcagcgcgtagcatggtaaaaaacctcaaaaca
tgcgtcagtaacggtggttatggttttaattatgtgacgttgaatctcaccaatccccag
gtagctttttttcggaatgtaaaggtgaggcaggcgcttgctctggcgatcaaccagaca
cagatcatccaaattgcatttcatggattaggcgtccccagttttaatccggtacccact
aatcccgatacgtatctttctccagagatgaagaagctcgtggcacgcccagccctcgcc
tataatccttctgctgcgaaacagttactagcggaggcgggatggcaaccaggtctggat
ggggtccggatgcgaaatgggcagcgtcttcagtttacgatgatggttccagacaccagc
cagacgctgatagccgtggcggaaatgttgaaagcggactggcaggctgttggtatagat
atgcgcctgcgcgtcctgccattcaatctggaactagctaaattgcacccccatgggaaa
tgggatgcttccatgatcgtctggtcctatgatccggattactatcctagcggtgatggt
ttgtttaatactggtggtggtagtaattatggggattatagcaactccatgatggacaag
ctggttcgcgatagcacagaaaaaaacagtacaaaatttttgtatcaatatgagaattat
gcgtacgctcagcaaccggtgatttttctaccttatccgaagtacgttgtgaaatatact
caagacttgacccacgcacagttgatggaaggtgtttattctgtagattgccatcctcaa
cgcctacactga
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