Acidithiobacillus ferrooxidans ATCC 23270: AFE_3068
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Entry
AFE_3068 CDS
T00810
Symbol
pdhC
Name
(GenBank) pyruvate dehydrogenase complex, E2 and E3 components
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
afr
Acidithiobacillus ferrooxidans ATCC 23270
Pathway
afr00010
Glycolysis / Gluconeogenesis
afr00020
Citrate cycle (TCA cycle)
afr00260
Glycine, serine and threonine metabolism
afr00280
Valine, leucine and isoleucine degradation
afr00310
Lysine degradation
afr00620
Pyruvate metabolism
afr00630
Glyoxylate and dicarboxylate metabolism
afr00640
Propanoate metabolism
afr00670
One carbon pool by folate
afr00785
Lipoic acid metabolism
afr01100
Metabolic pathways
afr01110
Biosynthesis of secondary metabolites
afr01120
Microbial metabolism in diverse environments
afr01200
Carbon metabolism
afr01210
2-Oxocarboxylic acid metabolism
afr01240
Biosynthesis of cofactors
Module
afr_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
afr_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
afr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
AFE_3068 (pdhC)
00020 Citrate cycle (TCA cycle)
AFE_3068 (pdhC)
00620 Pyruvate metabolism
AFE_3068 (pdhC)
00630 Glyoxylate and dicarboxylate metabolism
AFE_3068 (pdhC)
00640 Propanoate metabolism
AFE_3068 (pdhC)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AFE_3068 (pdhC)
00280 Valine, leucine and isoleucine degradation
AFE_3068 (pdhC)
00310 Lysine degradation
AFE_3068 (pdhC)
00380 Tryptophan metabolism
AFE_3068 (pdhC)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
AFE_3068 (pdhC)
00670 One carbon pool by folate
AFE_3068 (pdhC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afr04147
]
AFE_3068 (pdhC)
Enzymes [BR:
afr01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
AFE_3068 (pdhC)
Exosome [BR:
afr04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
AFE_3068 (pdhC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
2-oxoacid_dh
Pyr_redox_dim
Biotin_lipoyl
Pyr_redox
E3_binding
Pyr_redox_3
3HCDH_N
2-Hacid_dh_C
NAD_binding_8
FAD_binding_3
GIDA
AlaDh_PNT_C
TrkA_N
FAD_oxidored
Thi4
NAD_binding_2
FAD_binding_2
NAD_Gly3P_dh_N
HI0933_like
Ribosomal_S11
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
ACK79015
UniProt:
B7JAH7
LinkDB
All DBs
Position
complement(2755513..2758464)
Genome browser
AA seq
983 aa
AA seq
DB search
MAEPYVIKMPQLSDTMTEGVLVSWEKPAGARVERGDVVATVETDKAIMDVEVFRSGYLAG
PLAEANSVIPVGGTIGYITDSAVETVAAPVPAAPAVVPTGPASATPPAPEGYAVKMPQLS
DTMTEGVLVSWEKAPGDRIQRGDVVATVETDKAIMDVEVFREGYLSGPLVAVDAVVPVGE
AIAWLVESPEQVSHENAVHDGGLRQPDATSAPVATPLPAAAMSGPVPGADPAPRPQQGAA
SPFARQLAGQRGVDINGLRGTGPAGVIVAADVLGAAGGRAAPVASSGTAEPAVPGNGRAM
TAIERAISQAMAASLSIPVFHVTVQVRPEALIRAAKAHKLSVTVAIAKAASQALHRHPLV
NAAYQPVDKIVERSQHDIGIAATTEDGGLIVPVLRGVEGKTPEQLQTEWTSLLEKARKRR
LSPPEYTNPTFTISNMGMYGIAQFDAIVTPGTAAIIAIAGNGPEGMPITITADHRVVNGA
EAALFLNDLKQAIEHPENWLGSGGPVIPEGDYDVQVLVIGAGPGGEDCARELAENGIRVA
MVNDAPLPGGECLWRGCIPSKAWRAAADRIRDREHDAAMGITLGTPRLDWAQLEQHRRGI
LQTRGEMALKTDQGVKIQVLEGYARFTGDHSVEISGKDARTLTFGACVIATGAPAFVPPI
PGIQDALKSGAAVTSDTVWNLKQPPARLCVIGAGAIGMEMAQMFHDFGAEVRVLEALPRP
VAEMEKEVAEQLMKAIAHNSLRLQVLTGVKVTEVAGQPGQLEVRYQSGDEAANYACDLLL
VATGKRPDTSGLNLAAAGVALGDRAVIAVDASGRTNVPHIYAVGDVIGGYMLAHTAGQQG
RVAAASLLGHSARYEAAKDCGVTFTRPQCAFVGLSLEQARAEGIDAVEVKVPLSIDAKAM
MTGETDGLIKIVADKISHRIVGVHFLADHADTLVGEAVMMVSAGLTLEQVAGAIHPHPTQ
TELFGEMARRLLSRLRRSARAAS
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccttacgtcatcaaaatgccgcaactttccgacaccatgacggaaggtgtc
cttgtatcctgggagaagcctgcgggcgcgcgggtagagcgtggcgacgtggtggcgacg
gtggaaacggacaaggccatcatggatgtcgaggtgtttcgttccggttacctggcgggg
cccctggccgaggccaacagtgtcattccggtgggcgggactatcggctatatcaccgat
agcgcggtggaaacggtggcagcgcctgttcctgcagcgcctgcggtcgtgccgacgggg
ccggcatccgctacgccacccgcccctgagggctatgcggtgaagatgccgcagctctcc
gacaccatgaccgaaggtgtgctggtatcctgggaaaaggcaccgggggacaggatacag
cgcggggatgtggtggcgacggtggaaacggacaaggccatcatggacgtggaagtgttc
cgtgagggatacctgtcgggtcctttggtggccgtggatgcggtggtgcccgtaggagag
gccatcgcctggctagtggagtcaccggagcaggtaagccacgaaaacgctgtccatgac
ggagggctgcgccagcccgatgcgacatcggcgccggtagcgactcccttgcctgctgcc
gccatgtctggcccagtaccgggcgcagatccggcgccgcgtccgcagcaaggggccgcc
agcccctttgcccggcagttggcgggccagcgaggtgtggatatcaacgggctgcgcggt
acggggccagcgggcgtgatcgtcgccgcagatgttctcggcgctgctggtggccgtgca
gccccggtcgcgtcgagcggtactgccgagcccgcggtgcccggtaacggccgcgccatg
acggccatcgaaagagcgatcagccaggcgatggccgcttccctgagtattccggttttt
catgtcaccgtgcaggtcaggcccgaggcgctgatccgcgccgccaaggcacacaagctt
tccgtcacggtggcgatcgccaaggccgcttcgcaggcgttgcaccgacaccctctggtg
aatgccgcttatcagcctgtggataagattgtcgaacgcagtcagcatgacatcggcatt
gccgcgactacggaagacggtggtctgattgtgcctgtcctgcgcggtgtcgaaggcaag
acgccggagcagttgcagacggagtggacctcattgctggagaaggcgcgcaaacgtcgt
ctcagtccacctgaatataccaaccctacctttaccatctcgaacatggggatgtacggc
attgcccagttcgatgccatcgtcaccccggggacggcggccatcattgcgatcgccggg
aatggacccgaaggcatgcccatcaccatcacggcagaccaccgggtggtcaatggcgcc
gaggcggcgctgttcctcaatgacctgaaacaggccattgagcatcccgagaactggctg
ggtagcggcggcccggtgattcccgaaggggattacgacgtgcaagtgctggtcatcggc
gcaggccccggcggcgaagactgcgcccgcgagctcgcagagaacggtatcagggtggcc
atggtcaacgatgcgcccctgccgggcggcgaatgtctgtggcggggctgcattccctcc
aaggcttggcgcgctgctgcggatcgcatccgcgaccgcgagcacgacgcggcgatgggc
attaccctgggcactcccaggctggattgggcacaactggaacagcatcggcgcggtatt
ctccagacccgcggagaaatggccctgaaaaccgatcagggtgtgaaaattcaggtgctg
gaaggctatgcccgtttcaccggtgaccacagcgtcgagatcagcggcaaggatgcgcgg
accctgaccttcggagcctgtgtcattgctacgggcgcacccgcctttgtgccgccgatt
cccggcattcaggacgcgttgaagagtggtgcggcggtgacttccgatacggtctggaac
ctgaaacagccgcccgcgcgcctctgcgtcatcggcgccggcgccatcggtatggaaatg
gcgcagatgttccacgacttcggcgccgaagtgcgggtactggaagccctgccacggccg
gtggccgagatggaaaaggaagtcgccgaacagttgatgaaggccatcgcccataacagc
ctgcgtttgcaggtgctgaccggagtcaaggtgacggaggtcgcggggcaacccggccag
ttggaggtgcgttaccagtcaggcgacgaggcggcgaattatgcctgtgatctgctgctg
gtggcgacgggtaagcgcccggataccagtgggctgaatctggccgcggccggtgtggct
ttgggagatcgcgccgtcatcgccgtcgatgcctccgggcgcaccaatgtgccccatatc
tatgcggtcggtgatgtcatcggcggctacatgctggcccacaccgccggtcagcaggga
cgggtggcggccgccagtttgcttggccacagcgctcgttatgaagcggctaaagactgc
ggggtgaccttcacccggccccagtgcgcgtttgtcggcctttccctggagcaggccagg
gcggaagggatcgacgcggtcgaggtcaaggtgcccctgagcatcgatgccaaggccatg
atgaccggcgagaccgacggactgatcaagatcgtcgccgacaagatcagccaccgtatc
gtcggtgtgcatttcctcgccgatcatgccgataccctggtgggcgaggccgtgatgatg
gtcagcgccggtttgaccctggagcaggtggctggcgccattcatccccatccgactcag
accgaactcttcggcgaaatggcgcgacgcctgttatcccgcctgcggcgcagtgcccgg
gcggcgagctga
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