Acidithiobacillus ferrooxidans ATCC 23270: AFE_3294
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Entry
AFE_3294 CDS
T00810
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
afr
Acidithiobacillus ferrooxidans ATCC 23270
Pathway
afr00521
Streptomycin biosynthesis
afr00523
Polyketide sugar unit biosynthesis
afr00541
Biosynthesis of various nucleotide sugars
afr01100
Metabolic pathways
afr01110
Biosynthesis of secondary metabolites
afr01250
Biosynthesis of nucleotide sugars
Module
afr_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
afr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
AFE_3294 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
AFE_3294 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
AFE_3294 (rfbC)
Enzymes [BR:
afr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
AFE_3294 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ACK79054
UniProt:
B7JBH2
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All DBs
Position
complement(2969256..2969804)
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AA seq
182 aa
AA seq
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MKVEALSIPEVLLIAPKVFGDVRGFFMESWNRRAFAAAGLDLDFVQDNHSRSQQGVLRGL
HYQIHQPQGKLVRVVSGAVFDVAVDLRRSSPHFGRWAGATLSAENQQMLWVPPGFAHGFY
VLSESADFLYKTTEFYAPEAERCVIWNDPDIAIDWPLVDGKPPLLATKDAAGLPLSASET
FP
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagtcgaagccctcagcatccccgaggttctcctcatcgcccccaaggttttcggt
gacgtccggggatttttcatggaaagctggaatcgacgcgccttcgctgcggccgggctg
gacctcgacttcgtgcaggacaaccacagccgctcccagcagggcgtcctgcgcgggctg
cactatcagattcatcagccccagggcaaactggtacgtgtcgtgagcggtgcggttttc
gacgtggcggtggatctacgccgctcctcgccacacttcggacgatgggctggcgccaca
ctctccgccgaaaatcagcagatgctctgggtacctcctggtttcgcccacggcttttac
gtgctcagcgagtcggcggactttctctacaaaaccacggagttttatgccccggaagcg
gagcgctgcgtgatctggaacgacccggatatcgccatcgactggcccctggtggatggt
aagccacccctgctggccaccaaggatgccgccgggctgcctttatcggcgagtgagacc
tttccgtga
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