Artemia franciscana: 136025837
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Entry
136025837 CDS
T10524
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
afra Artemia franciscana
Pathway
afra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136025837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afra03019
]
136025837
Messenger RNA biogenesis [BR:
afra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
136025837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
136025837
NCBI-ProteinID:
XP_065557915
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Position
1:complement(12589219..12648562)
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AA seq
442 aa
AA seq
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MDELLPPGEEIQVAEARLKVGNGEALSDNAENGKVEDVADGLSDLESDEDDVQVTIKALP
LAPSAYAPNFMKKGPGPSVEKGKFAPEDFEGPMSINGVPAVDFNLEDLEDKPWRKPGADI
TDFFNFGFTEETWHAYCERHKRLRAESGVGNLNLPRIFTNFQPSTIVNENSKYNTIGVIK
RSAIQSSLPVKTIPTLNPAKIDVIGVTSSSRRSETEILPPGIGEEAVAADKVPDLSIPPP
GIGMETKFNPYGSTDYPFYGGYNEPAQISQWSGQEPWRPPPMGVPPPVRMQPPSISSGIR
PSADDTEAVTPPPPGADERETSVRSTRPPRSPDDEGDRRRREYRDRARERDKDRDRDRDD
KDREKESYRERDKERDRDRERDRERERERDRDRHRDRDGDREREKERERRERKERRRRER
SSSRSPTRHKKSKKTKRHSDSE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggatgaattattacctccaggtgaagaaatacaagttgctgaagcacgattaaaagtt
ggaaatggtgaagcccttagtgacaatgctgaaaatggcaaagttgaggatgtggccgac
ggactcagtgaccttgaatctgacgaagatgacgtacaagttacgattaaggctctcccc
cttgccccttcagcctatgcaccaaattttatgaaaaaaggaccaggaccttcagtagaa
aaaggaaagtttgcccctgaggattttgaaggacctatgtccattaatggtgtacctgca
gtggatttcaatttggaagatttagaagacaagccttggcgtaaacctggggcagatatt
acagatttctttaattttggcttcactgaagaaacatggcatgcatattgtgagcgtcac
aagcgattacgcgctgaatccggtgttggtaacctaaatttaccgagaatttttactaac
ttccaaccctcgactatagttaacgaaaactccaagtataataccattggtgtcattaaa
cgatctgcaattcaaagctctttgcccgtaaaaaccattcctactttaaacccagcgaaa
atcgatgttattggtgtgacatctagttcgcgccgaagtgaaacagaaattcttccacct
ggcattggtgaggaagcagtagcagcagacaaagttccagatttgtcaatccctcctcct
ggaataggaatggaaacaaagttcaatccttatggatctacagattatccattttacggg
ggatataatgaacctgctcaaattagtcaatggtctggacaagagccttggagaccaccg
cctatgggagttccacctcctgttagaatgcagcctccatccatatcttccggcataaga
ccttcagctgatgatactgaggcggtgactcctcctccacctggtgcagatgagagggag
acatcggttcgaagcacaaggccaccaagatcacctgacgacgaaggagatcgacgacgg
cgagaatatagagacagagcccgagaaagagacaaagacagggacagagatcgtgatgat
aaggatagggaaaaggaaagttatagagaacgagacaaagaaagagacagggatcgggag
agagatcgagagcgtgaacgtgaaagagatcgagatcggcatcgcgaccgggatggtgat
cgtgaacgagagaaagaaagagaacggcgtgagcggaaagaacgaagaagaagagaacga
tcttcaagtagaagcccaacacggcataagaaaagcaaaaagacgaaacgtcattctgat
tctgaataa
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