Artemia franciscana: 136025987
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Entry
136025987 CDS
T10524
Name
(RefSeq) lissencephaly-1 homolog isoform X1
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
afra Artemia franciscana
Pathway
afra00565
Ether lipid metabolism
afra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
136025987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afra03036
]
136025987
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afra04147
]
136025987
Chromosome and associated proteins [BR:
afra03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
136025987
Exosome [BR:
afra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
136025987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_EML
WD40_MABP1-WDR62_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_DCAF12
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_RIG_1st
Beta-prop_SPT8
LisH_PAC1
Beta-prop_WDR75_2nd
LisH
Beta-prop_NWD2_C
Beta-prop_WDR19_1st
Nucleoporin_N
PROPPIN
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
136025987
NCBI-ProteinID:
XP_065558196
LinkDB
All DBs
Position
4:11410146..11462513
Genome browser
AA seq
425 aa
AA seq
DB search
MRLPNHPIGNFRLSNKQQDELNRAIAEYLYSSGYAESYEVFKREADMPGDEEKKFAGLLE
KKWTSVIRLQKKVMELEAKLAEAEKEFISGAPTREKRSPSEWIPRPPERYSLSGHRAPVT
KVAFHPVFSVAVSASEDATIKIWDYESGEFERTLKGHTDSVQDVAFDQPGKLLASCSADL
SIKLWDFTTYDCIKTLHGHDHNVSSITFVPTGDFLLSASRDKTIKFWEVATGFCVKTLSG
HREWVRSVRVFFDGSLIASCSNDQTVRIWVMSTKECKMELRDHEHVVECIAWAPEASVGA
ISEGASTAGGSVQIDNRRGNYAGPFIASGSRDKTIKIWDASTGLCLFTLVGHDNWVRSLQ
FHHGGKYLLSASDDKTVRVWDLKSRRCLKTLEAHQHFCTSIDFHRSAPYVISGSVDQTVK
VWECR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttcctaatcatccaataggaaattttcgtctgagtaataagcaacaagatgaa
ctaaatcgtgcaatagctgaatatttatatagcagtggttatgctgaaagttatgaagtt
tttaagcgcgaagcagacatgccaggggacgaagagaaaaaattcgctggactacttgaa
aaaaaatggacctctgttatcagattacagaaaaaggtgatggagcttgaagcaaagttg
gcagaagctgaaaaggagttcattagtggcgctccaactagagagaaaagaagtccttct
gagtggattccaaggcctcctgaaaggtatagcctatctggccatagagctcctgtaaca
aaggtggcttttcacccagtgtttagcgtggctgtgtctgctagcgaagatgcaacaata
aaaatttgggactatgaatctggtgaatttgaaaggactctaaaaggtcatacagacagc
gtacaggatgttgcatttgaccaaccagggaaactgcttgcttcgtgtagcgcggaccta
tccatcaagctttgggatttcacaacctacgattgtataaagacattgcatggtcacgat
cataatgtaagcagtattacctttgtcccgactggagatttccttctctctgcctcgagg
gataaaactatcaaattctgggaagtagctactggtttctgtgtaaaaacactctcggga
caccgtgagtgggttcgaagtgtccgggtgttttttgatggatccctcatagcttcatgt
tccaatgatcaaactgtcagaatttgggtgatgtctaccaaagaatgcaaaatggagcta
cgagaccatgaacatgttgttgaatgcattgcttgggccccggaagcctctgttggagcg
atcagcgagggggcctccaccgctggcggaagtgtccaaattgacaataggcgtggcaat
tatgccgggccgtttattgcatctggatcaagagataaaactattaagatatgggacgca
tcaactggtctgtgtcttttcacgctagtggggcacgataactgggttcggtcccttcaa
tttcatcatggtggaaaataccttcttagcgctagtgatgataaaaccgttcgtgtatgg
gatttgaagtctagacgatgtttgaaaacacttgaggctcatcaacatttctgcacgtcc
attgattttcatcgctcagcaccttacgtgatctctggaagtgtagatcaaaccgtgaaa
gtttgggagtgccgttaa
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