Artemia franciscana: 136026077
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Entry
136026077 CDS
T10524
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
afra Artemia franciscana
Pathway
afra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136026077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afra03041
]
136026077
03009 Ribosome biogenesis [BR:
afra03009
]
136026077
Enzymes [BR:
afra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
136026077
Spliceosome [BR:
afra03041
]
Complex A
U1 snRNP components
U1 related factors
136026077
Complex B
136026077
Ribosome biogenesis [BR:
afra03009
]
Eukaryotic type
Pre-60S particles
Helicases
136026077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
DUF2443
Utp25_C
Clathrin
Motif
Other DBs
NCBI-GeneID:
136026077
NCBI-ProteinID:
XP_065558344
LinkDB
All DBs
Position
4:17476354..17478071
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AA seq
515 aa
AA seq
DB search
MSTTYLKQSYTRRQGDSARGYYPRFKESFNRQLEYYDNSGVNCFKPKQRTGISESYQKHV
YSPHSDIVKRSKEEIECYRASNEILVEGDDVPRPITSFKEAGFPDYLQSQLASQGFDSPT
PIQAQGWPIALSGRNMVGVASTGSGKTLAFILPSIVHIKHINAKEARGNGPIALVLAPTR
ELAQQIKVVADKYGKPSRIRSACVYGGSPKGPQLRDLERAELCIATPGRMNDFLEARKTN
LMQCTYLVLDEADRMLDMGFEPQIRKIFDQVRQDCQILMWSATWPKEVRRLAKDFVGEHI
MLNVGSTNLSASHNIKQIVDICEEHEKVSKLHSFLNKISKEQQKKIIIFVETKRRVEFIA
KTIYRAGHNVGAIHGDKIQEERDKILNAFRSGRINILVATDVAARGLDVDGVDFVINYDY
PQNSEDYIHRIGRTGRSNQTGTAYTFFSRKDGRKANDLIRVLSEANQVVRPELQDIAKKF
TETGSNKVGYRNSFGRRGGFWGRNDYRSYPAPRRW
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaacctatttgaaacaaagctacactagaagacaaggtgatagtgcaagagga
tactatccccgttttaaggagtcttttaatagacagttagaatattatgacaattccggc
gtaaactgtttcaagccaaaacagagaacgggtatctcagaatcatatcaaaaacatgtg
tattctccgcattctgatatcgtgaagagatctaaagaggagatagagtgttaccgtgct
tccaatgaaattttagttgaaggagatgatgtgcctcgcccgattacttcatttaaggaa
gctgggtttcctgattatttacagtctcagttggcatcacaagggtttgatagtccaact
ccaattcaagctcagggatggcctatcgctttatctggtagaaatatggtgggtgtggcg
tcaacaggatcaggaaagacgttggcctttatactaccatctattgttcatattaaacat
attaatgcgaaagaggcgagggggaatggacccatagctttggttttggccccaactaga
gaattagctcagcagatcaaagttgtggctgacaaatatggaaaaccatctcgcattaga
agtgcatgtgtctatggaggttctcctaaggggcctcagttacgcgatttagaacgagct
gagctctgcatagctacacctggaagaatgaatgacttcttagaagcaagaaaaacaaat
ctcatgcagtgtacatacctcgtcctggacgaagcagatagaatgcttgatatgggtttt
gaacctcaaattagaaaaatttttgatcaagtgagacaagactgtcaaattctcatgtgg
tctgccacttggcccaaggaagttagacgtctagccaaagattttgtcggcgaacatatt
atgttgaacgttgggtcaacgaatctctcggccagccataatattaagcagattgtcgat
atatgcgaggaacatgagaaagtcagcaagctgcattcatttcttaataaaatctcaaaa
gaacagcagaaaaaaataataattttcgtggaaactaagagaagggtagaatttattgcc
aaaacaatttacagagccgggcataatgttggtgccatccatggtgacaaaattcaagag
gaacgagataagattctcaatgcattcagaagtggtaggataaatatattggtggcaaca
gatgttgcagctcgcggtctagacgtggacggcgtagacttcgtgattaactacgattat
ccccaaaacagtgaagattatatacacaggataggaagaacgggaagatccaaccaaact
ggtaccgcttacacattcttctcacgaaaggatggaagaaaagcaaatgatttaattaga
gtcctctctgaagcgaatcaggtggtaaggcctgaattgcaggatattgctaaaaagttc
accgaaacaggcagcaataaagttggttatcgtaatagctttggaagaagaggtggattt
tgggggcgtaatgactaccgaagttatcctgctcccagacgatggtaa
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