Artemia franciscana: 136026173
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Entry
136026173 CDS
T10524
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
afra Artemia franciscana
Pathway
afra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136026173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afra03041
]
136026173
03009 Ribosome biogenesis [BR:
afra03009
]
136026173
Enzymes [BR:
afra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
136026173
Spliceosome [BR:
afra03041
]
Complex A
U1 snRNP components
U1 related factors
136026173
Complex B
136026173
Ribosome biogenesis [BR:
afra03009
]
Eukaryotic type
Pre-60S particles
Helicases
136026173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
YcbB
Ins_allergen_rp
LAGLIDADG_3
Motif
Other DBs
NCBI-GeneID:
136026173
NCBI-ProteinID:
XP_065558569
LinkDB
All DBs
Position
4:complement(23655160..23724833)
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AA seq
567 aa
AA seq
DB search
MSYRGSRGGSFRGRGSGPRKSLGKNDQPGQSLRAPRWNTLQLAPFEKDFYIPHPAVQHRS
HQEVEAFRRSQEITVFGNQIPHPITQFLEGNFPDYVMSEIMRQGYSEPTAIQAQGWPIAL
SGRDLVGIAMTGSGKTLAYILPAIVHINNQAYLEPGDGPIALVLAPTRELAQQIQQVAKE
FGVSSRIRNTCVFGGAPKGPQQRDLSRGVEICIATPGRLIDFLQAGATNLRRCTYLVLDE
ADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVRTLAEEFLTDYIMLNVGSLTLAA
NHNILQIVDVCSEYEKDRKLAQLIEEIMSNDLNKTMVFAETKKKVDSITQRLRRDGWPAM
CIHGDKNQPERDWVLKEFRHGSCSILVATDVAARGLDVEDVQFVINYDYPNCSEDYVHRI
GRTGRSHHTGTSYTFFTTDNVAKAGDLIGVLTEAKQVVNPQLYELAEQAKYSSGKQGRSR
WGGPPHRQSRGAPRGGMGGRGGGFSQRGRGSTMSRPTREAPSYSREAPSYSRETSSYSGH
HGQNGQMAQRGYPNERLGRPFNSYGGF
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgtcctaccgtggtagcagaggaggatcgtttagaggaagaggatcaggcccaagaaaa
agcttgggaaaaaatgatcaaccaggccaatcattaagagcaccaaggtggaacacattg
cagcttgcaccttttgagaaagatttttacatcccacatcctgcagtgcagcataggtct
caccaggaggtagaagccttccgtagaagtcaagagatcacagtatttggcaatcagata
ccacatccaatcacccagtttcttgaagggaatttcccagattacgtcatgagtgaaata
atgcgtcaaggctattctgagccaacggcaatacaagctcaaggctggccaattgcttta
tctgggcgagatctagttggtatagcaatgacaggatctggcaaaactttggcttatata
ttacctgctattgttcatataaacaaccaagcttatttggaacctggtgatggacctata
gccctggttttggctccaacaagagaattggcccaacaaattcagcaggttgctaaggag
tttggggtctcatcaagaataagaaatacttgtgtttttggtggtgctcccaaaggacct
caacaaagagacttgagtcgcggtgttgagatttgcatcgccactccaggaaggttgatt
gattttttacaagccggtgcgaccaacttgagaaggtgcacttacttggttttagatgaa
gctgaccggatgttagatatggggtttgagcctcaaatcagaaaaattattgaacaaatt
cgaccggaccgacaaactctcatgtggtctgctacttggcctaaagaagtcaggactttg
gctgaagaatttttgactgattatatcatgttgaatgttgggtcattgactttggcggcc
aaccacaatattctccaaattgtcgatgtttgctctgagtacgaaaaggatcgaaagtta
gctcaactgattgaagaaataatgtctaatgacttaaataagaccatggtctttgctgaa
actaagaaaaaagtggattcaattactcaaaggcttcgccgcgacggctggccggctatg
tgtattcatggcgataaaaatcaacccgaaagagattgggttcttaaggaatttcgtcat
gggagttgttccatacttgtagcgacggatgtcgcggctagaggactggatgtggaggat
gtacagtttgtcatcaattacgattaccccaattgcagtgaagactatgtccatcgtatc
ggtaggactggacggtctcatcacactggcacgtcatatacgtttttcaccacggacaac
gttgccaaagcaggagacctaattggtgtgctcacagaagcaaagcaggttgtcaacccc
caactgtatgagctagctgagcaagcaaaatattcaagcggtaaacaaggtcgaagtcgt
tggggtggtcctcctcatagacaaagtcgtggagctcctcgtggtggaatgggaggcaga
ggaggaggtttttctcagagaggacgtggtagtactatgtcaagacctactcgcgaagca
ccctcatattctcgtgaggctccctcatattctcgtgagacttcgtcgtattcaggtcat
catggacaaaatggccagatggcccagcgaggatatcccaatgaacgacttggcagacca
ttcaattcttatggtggtttttag
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