Artemia franciscana: 136026874
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Entry
136026874 CDS
T10524
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
afra Artemia franciscana
Pathway
afra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136026874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afra04121
]
136026874
Enzymes [BR:
afra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136026874
Ubiquitin system [BR:
afra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136026874
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
136026874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
zf-C3HC4_2
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_WDR19_1st
ANAPC4_WD40
zf-C3HC4
Beta-prop_WDR90_POC16_2nd
zf-RING_2
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
zf-RING_UBOX
WD40_RFWD3
zf-C3HC4_3
Beta-prop_Vps41
WD40_like
Beta-prop_WDR35_TULP_N
zf-RING_5
zf-C3HC4_4
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF12
RING_XB3-XBAT31
zf-rbx1
zf-RING_10
Sina_RING
zf-P11
Motif
Other DBs
NCBI-GeneID:
136026874
NCBI-ProteinID:
XP_065559734
LinkDB
All DBs
Position
5:2749149..2769415
Genome browser
AA seq
594 aa
AA seq
DB search
MASNPKRGKFNGSPGESTVLDRNNEFLCPICFEIIEEAFVTICGHSFCYGCITESLETSD
RCPKCNFVFQCQKKIFPNFLLNELIAKAKLGIDQKLTINKSNYPDFVEGLQSSDIKVTLP
DVNLMLNLLTERKKQLESDLKLNQLELMKEFLTIIKNKRQDEIERLNQELALIERDEFSV
NESIRGICPSVAEVNESPLVPDIPYKMAPEVNNVAETVRGISDIKRKRLYEQMDDLEAFY
LEKKTNDFHLDTSGDTEEFSDMLSKFTRYSSLRPLATVHYASDVFNNSSIVSSIEFDKDG
DYFAVAGVTKRVKLYEFSSIVNSAMELHYPVLEIVGSSKVSWLTYNYFHKNYLGSSDYEG
NVTIWDVSTGKRLRSYQEHERRCWTVDFNRVDTNLLASGSDDAKLKLWSLNASHSVATIE
AKANICCVRFNPESRYHLAYGSADHSVYYYDIRNSRSPLMVYKEHKKAVSYVKFVSSSEI
VSASTDSQLKLWSTSQLNSFRTFKGHVNEKNFVGLAASGDFVSCGSENNAVYLYYKKMSK
PILDFKFDHVKNVLDRGNKEEENNEFVSAVCWKRNSNYIVAANSQGIVKVLEIE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaatccaaaaagagggaaatttaacggaagccctggtgagagtactgtacta
gacagaaataatgagtttctttgtcctatttgctttgaaatcatcgaggaagcatttgtt
acaatttgtggacacagtttttgctatggatgcattaccgaaagcctcgaaacgtcagat
cgatgtcctaaatgcaactttgtttttcagtgtcagaaaaaaatatttccaaacttcctg
cttaatgagttaattgctaaagctaagcttggaattgatcagaaattaaccataaataaa
tcgaactatcctgattttgttgaaggtttacagtccagcgacatcaaagtcaccttgcct
gacgtaaatctgatgttgaatcttttgactgaacgaaaaaaacaacttgaaagtgatcta
aagttgaatcagttggaactaatgaaggaatttctcacaatcattaaaaataaaaggcag
gacgaaatcgaacggcttaatcaggaactagcgctcattgagcgtgatgagttttctgtc
aacgaaagcatccgcggtatatgtccctctgttgcagaggtcaatgaatccccacttgta
cctgatattccgtacaaaatggctccagaagttaacaatgttgctgaaaccgtccgcgga
atctctgacataaaacgaaagaggctgtatgaacagatggatgacttagaagcattttac
cttgaaaagaagactaatgattttcatcttgatactagtggtgatactgaggaatttagt
gatatgctctctaaatttacacgctattctagtttacgtccgctagcgactgttcactat
gcgagtgatgtctttaacaactccagcatcgtctctagtatagaatttgacaaagatggt
gattattttgcggttgcaggtgttacaaaaagagtgaaactttatgagttttcgtcaatt
gttaatagtgccatggaattgcattatccagtccttgaaattgttggaagttctaaagtc
agttggcttacatacaattattttcataaaaactaccttggtagtagcgactacgaagga
aacgtaactatatgggatgtttcaactggtaagagacttcggagctatcaagagcatgag
cgtcgctgttggactgttgattttaaccgtgttgataccaatttgctagcctctggcagt
gacgatgccaaactgaaactatggtcccttaatgctagccacagtgttgcaacgatcgaa
gctaaggcaaatatatgctgcgttagatttaatccagaaagcaggtaccatcttgcctat
ggttcagccgatcatagtgtatattattatgatattcgaaattcaagaagtccactgatg
gtttataaagagcataagaaagctgtctcttatgttaaatttgtgtctagttctgagatt
gtgtccgcttctacagacagccaattgaagctgtggagcacgtctcagctgaactccttc
cgcactttcaaaggacacgtaaatgaaaagaactttgttggattagcagcaagcggtgat
tttgtttcctgtgggtctgaaaacaatgctgtctatctgtactataaaaaaatgtccaaa
cctattttggattttaagttcgatcacgtgaaaaacgttttagataggggcaacaaagaa
gaggagaataatgagtttgtctctgctgtttgttggaagaggaattcgaattatattgtt
gcagcaaatagtcaagggattgtcaaagtccttgaaattgaataa
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