Artemia franciscana: 136027013
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Entry
136027013 CDS
T10524
Name
(RefSeq) collagen alpha-1(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
afra Artemia franciscana
Pathway
afra04512
ECM-receptor interaction
afra04820
Cytoskeleton in muscle cells
Brite
Exosome [BR:
afra04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
136027013
Glycosaminoglycan binding proteins [BR:
afra00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
136027013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136027013
NCBI-ProteinID:
XP_065559986
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Position
5:complement(15072309..15275025)
Genome browser
AA seq
2029 aa
AA seq
DB search
MKLIFFGLFLAAWAQLLTAQRSYSRRRTRQEYEEQLLPDYSYESGFPEGNGGDYDGTDYN
VNSFPREPAPPQPPPSAGCVGSQCTASCNGSGCQIQSTCEGRNCDQIPCRGPKCLIHQVC
SGECSYNPCQGSSCQVKESSCPGKDCRIRTYCEGRDCKLKPASGQNSITHTICSGDDCIA
IPCDNCAIRTLCTSENCRCLNEFCEVRHANSQSDGCKGCTDRCAECQGIKGEAGQKGQVG
MQGSTGFPGASGPEGRQGEKGSKGDTGGAGMIGELGYRGDNGIAGLTGPPGTPGFSGLEG
PQGIPGIHGCNGTDGQLGAPGSPGAPGRRGADGPNGNPGQKGDRGDLLFSSSIKGEQGEP
GRPGGMGYPGFPGIPGIKGSKGESGRGFPGQTGDQGERGERGEPRGPGPKGTKGEPGNIG
PSGAPAQFRELPEEVATGETGSPGPYGQPGEKGVSGEDGISGSRGKIGLRGPFGEKGCKG
TPGSKGQPGNDGIPGIEGFKGDKGDFGRKGSDGNDGPKGDIGERGYQGPPGSQGAKGEPA
LILQGPKGTIGERGLYGYPGIQGPYGNEGPEGPRGSEGPFGFQGPNGLQGRPGQPGRSQK
GEFGENGQPGYFGSPGDIGSRGLRGLRGKKGCKGTRVKGPDGTPGIPGIPGRPGNSGDTG
NTGYPGQKGLAGVCYGEECVGARGPPGQKGIIGEDGQDGAYGAMGAQGPKGCMGIPGVCG
CTNLEGEKGDEGDSGTEGRKGYKGPPGSYGENGDFGLIGQQGQPGQPGGNGRPGYQGYQG
PAGVKGPPGEIIYEGAEMSGPKGIKGFVGYPGIEGNRGLYGLPGERGNPGLKGSFGRKGE
EGDTGNPGRNGFPGRPGLPGNTPNPNEAEKGSPGFPGIRGETGDYGLQGPPGDCGDIVYP
QLKPGETGDKGREGSKGVKGKPGDDGCIGKQGFRGRPGPPGSMGMPGISGLEGHQGKHGE
AGDSGHLGSQGQPGCKGEKGSKGPKGNKGLRGNPGVGIQGPLGDKGIPGKNGDRGHKGRQ
GETGNEGGLGAKGIKGISGEQGTTDGEDGFMGQHGDIGDYGMPGKQGQRGIRGILGSVGD
KGPTGEFGQRGYEGVKGEKGCRGPIGYIGEVGDPGFLGPQGKKGQSGIGGPTGRRGRKGD
IGIGMPGRPGRTGRRGRRGSKGIRGEQGFQGQSIYPGPDGFKGPGGDKGVKGYQGDQGET
ILIYGDDGDAGEMGPKGYRGIPGWDGSQGPRGEKGITVFGPKGQKGTEGEEGIRGRNGEC
CGLKGVQGERGKTGDQGYRGEIGEPGSPGYGGQNGIPGMKGEYGTPGRQGKDGKNGRNGR
IGDTGQSGRRGPIGEPGYRGQSGRNGNDGIKGKIGESPEGMAGFEGGPGEKGIAGTKGLK
GSRGNRGPKGEEARKGVKGRTGEKGFRGMEGEDGTPGQSGESGELGPRGPKGFPANRPGE
KGAIGDMGYDGVRGQCDEGPKGPPGETGSCGTPGIPGLPGPAGISPAGQKGEKGVKNYQI
GPKGPPGRQGNTGNRGDLGRKGSLGDTGPRGPQGFSGIKGEEGYSLKGYKGDKGEGGDIG
PQGRRGVSGNKGQRGLNGFVGSAGGIGLPGNKGMKGNTGSPSDNDKGIRGDEGDIGVPGP
QGSRGLNGKIGLPGERGEDGERGSHGEFGQIGEIGFKGEMGHRGRQGASGPRGAKGSKGT
LGQDGVQTHLKKLSYFITRHSQSRQIPECPIGTKKMWDGFSLSHFVGDHLSQDQDLEWYD
IGQPSSCLQVFNPMPFIFCSSRNSSETCNYASRNDYSYWLSTENGQRRSTRFTNIEGDEI
KNYVSRCSVCEATRNVITVHSQSAEVPDCPLNWMELWSGYSFLMSADGKKGAGQQLSSPG
SCLETFQHIPFIECHGRGTCNYFTSSLSFWLSSIDESHMFKKPKNETFKGEAYLRKVSRC
SVCLRIQSSIQITTSRPVATTATPTVPTLDISASGDGLTTDDEDLVTGSGDGQLTSSGDY
EDSEEETTVEIVTYDWGTDSPVVPPSRRRRHKEKVYSTWTLDDSDYLDF
NT seq
6090 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgatatttttcggactatttttagcagcctgggcccaattattgacggctcag
cgttcttatagccggcgaagaactcgtcaagaatacgaagagcaacttttgcctgattat
tcttatgaatcagggtttccagagggtaacggcggtgattacgatggaacagattataat
gttaattcatttccaagagagccagctcctcctcagccaccaccttctgcaggatgtgtt
gggagccaatgtaccgcgtcttgcaacggttctggctgccaaattcaaagcacctgtgag
ggacgtaattgcgatcaaattccatgtcgtggtccaaagtgcctaatacaccaagtttgc
agtggtgaatgtagctataatccttgccagggaagctcctgtcaagttaaagaaagttct
tgccctgggaaagactgccgaataaggacatattgtgagggaagagactgcaagttaaaa
ccagcatcaggacaaaatagtattactcataccatctgttcaggagatgattgcattgcc
attccatgtgataactgtgcgatccgtactctatgtacctccgaaaactgcagatgctta
aatgaattctgtgaagtgaggcacgcaaacagtcaatcagatggttgtaaaggatgcacg
gaccgctgtgcagagtgtcaaggaataaagggtgaggcaggtcaaaaggggcaagttgga
atgcaaggaagtactggatttcctggtgcatcgggacctgaagggaggcaaggagaaaaa
ggatctaaaggagacacaggaggtgctggaatgataggagagttgggctataggggtgac
aacggaatagctggactaacaggaccacctggaactccgggtttttctggattggaaggt
ccacaaggtatcccaggcattcatggctgtaatggaacagatggtcaattaggtgcacca
ggttcacctggtgccccaggaagaagaggagctgacggtcctaatggaaacccaggtcaa
aaaggagatagaggggaccttttgtttagttcttccatcaaaggtgaacaaggagaacca
gggagaccgggtggaatgggttatcctggatttcctggcattcctgggatcaaagggtcg
aagggcgagtctggaaggggattccctggccaaactggtgatcaaggtgaacgtggtgaa
agaggggaacctcgtggacctggtccgaaagggacaaaaggtgaaccaggaaatatagga
ccaagtggagcaccagctcagtttcgtgaacttccagaagaagtggctactggcgaaact
ggaagtcctggtccatatgggcaacctggtgagaagggggtttccggtgaagatggtatt
tctggatctaggggaaaaatcggtcttcgtgggccatttggagaaaaaggatgtaaagga
acacctgggtctaaaggtcagcctggaaacgatggaataccgggaatagaaggattcaaa
ggagataagggagactttggtaggaaaggcagcgatggaaatgatggacctaagggtgac
attggtgagcgaggttatcaaggcccgccgggtagtcaaggtgcaaaaggagaaccagct
cttattttacagggaccaaaaggaacaattggggaaagaggactgtacggataccccgga
atccaaggaccttatggaaacgaaggtccagaaggtcccagaggttctgaagggccattt
ggatttcaaggacctaatggacttcaaggacggcctggccagcctgggaggtcacagaaa
ggagaatttggtgaaaatggtcaacctggatattttggttcaccaggtgacattggatcc
agaggtctacggggtcttcgtggaaagaaaggttgtaaaggaactcgagtgaaaggtcca
gatggaactcctggaataccgggcattccaggcagacctgggaatagcggtgatacggga
aatactggttatccaggtcagaaaggacttgctggtgtgtgctacggagaagaatgtgtt
ggagctcgtggaccaccaggtcaaaagggaattattggtgaggacggccaagatggtgcg
tatggtgctatgggtgctcaaggaccgaaaggttgcatgggtatacctggagtctgtgga
tgcactaatcttgaaggtgaaaagggtgacgaaggtgattctgggactgaaggtcgaaag
ggttataaagggccaccaggcagctatggagagaatggtgattttggtctcataggccag
caaggacagcccggacaaccaggaggaaatggcagaccaggatatcaaggatatcaagga
cctgcaggagtgaaaggaccacctggtgagattatctatgaaggtgctgaaatgtccggg
ccaaaaggtataaagggttttgtggggtatccagggattgaaggaaaccgcggcttgtat
ggacttcccggtgaaagagggaatccaggcttgaaaggatcatttggacgtaagggagaa
gaaggagacaccggcaatcctggaagaaacggatttcctggacgacctggtcttcctggc
aatactccaaatcccaatgaagcagaaaaggggagccctgggtttcctggaataagaggt
gaaactggtgactacggtctacaagggcctccaggtgattgtggagacatcgtttacccc
caattaaaaccaggagaaacaggagataaaggaagggaaggtagcaagggtgtaaaaggc
aagccaggagatgacggatgtataggaaaacaaggttttagaggccgtcctggaccacct
ggctcaatgggaatgcctggaatttcaggtctagagggtcaccaaggtaaacatggtgaa
gcaggagactcaggacatcttgggtcacaaggtcaaccaggatgtaaaggcgaaaaggga
agtaagggacctaaaggaaataaagggcttcgaggcaaccccggtgttggcatacaagga
cctcttggagacaaaggaataccaggcaaaaatggggatcgcggacacaaaggacgtcaa
ggtgaaactggaaatgaaggagggctcggagcaaaagggataaagggaatttctggagag
cagggaacaacagatggagaggatggtttcatgggacaacacggagacattggtgattat
gggatgccgggaaagcaaggtcagagaggaataagaggtattctaggtagcgttggagat
aaagggccaacgggagaattcggacaaagaggttacgaaggagtaaaaggtgagaagggc
tgtagaggtccaataggttatatcggtgaagtaggggatccaggatttctgggtcctcag
ggaaagaaaggacaatctggaataggaggtccaaccggaagaagaggaaggaaaggagat
attggaataggaatgccgggtcggcctggtagaacaggcagaagaggaagaagaggaagc
aagggaatacgtggcgagcaaggttttcaaggccagagtatttatcctggacctgatggt
ttcaaaggaccaggtggcgacaaaggagtcaagggataccagggtgatcagggtgaaaca
atattaatttatggtgacgatggggatgctggagaaatgggtcctaaaggttatcgtggc
atccctggctgggatgggagtcaaggaccccgtggagaaaagggtattaccgtctttgga
cccaaaggacaaaaaggtacagaaggagaagaaggaatacgaggacgcaatggagaatgt
tgcggtttaaagggtgtgcaaggtgaacgtggaaaaacaggtgaccaaggttatcgtggt
gaaatcggtgagccaggttctcctggatatggaggtcagaacggtataccaggaatgaaa
ggtgaatacggcacaccagggcgccagggaaaggatgggaaaaatggaagaaatggaaga
ataggagacactggacagagtggtagacgtggacccatcggtgagccaggctatagaggt
cagtcaggtagaaatggaaacgatggtataaagggcaaaataggcgaatctcctgaagga
atggcagggttcgaaggcggcccaggtgagaaaggaatagcaggcacaaaaggactgaag
ggttcaaggggtaatcgtggtccaaagggagaggaagcaagaaaaggggtaaagggaaga
accggagaaaagggatttcggggaatggaaggtgaagatggtactccaggtcaaagtgga
gaatcaggagagcttgggccaaggggaccaaaagggttcccagccaatagacctggtgaa
aaaggtgccattggagatatgggttatgatggagtacgcggacaatgtgatgaaggacca
aagggtccaccgggcgaaacaggatcttgtggtactcctgggattccagggcttcctggt
cccgctgggatttcaccagctggacaaaagggagagaaaggtgttaaaaactatcagatt
gggcctaaaggtccacccggaaggcaaggtaatacaggtaaccgaggggatcttggtaga
aagggatctctgggagacactggacctagaggacctcaaggtttttcaggaataaaaggt
gaagaaggctattctttgaaaggatacaagggagataaaggtgaaggaggtgatattgga
ccccaaggtcggcgaggagtgtctggaaataagggccaaagaggtttaaacggatttgtt
ggatcagctggaggcataggtttacctggaaacaaaggtatgaaaggcaatactgggtca
cctagcgataacgacaagggcattcgaggagatgaaggagatatcggagtaccaggtccc
caaggttcaagaggcttaaatgggaaaataggtcttccgggtgaacgaggtgaagatgga
gaaagaggcagtcacggggaatttggccaaataggagaaattggattcaaaggtgaaatg
ggtcatcgaggaaggcagggtgcttccggcccaagaggtgctaaagggtcaaaggggacc
ttgggccaagacggagttcaaacacacttgaagaagctatcctactttatcactcgacat
tcacagtctcggcagattccagaatgtcctattggaaccaaaaagatgtgggatgggttc
tctctttcccattttgtaggtgatcatttatcacaggaccaagatcttgaatggtatgat
atagggcagccatctagttgtctccaagtcttcaacccgatgccatttattttctgctcc
agcagaaattcaagtgaaacctgcaattatgcttcaagaaacgattatagctattggtta
agcaccgaaaatggtcagagaaggtcaacaagattcacaaatattgaaggagacgaaata
aaaaactatgtctcaagatgttcggtgtgtgaagccactagaaatgtaataacagtccat
agtcagtcagcagaagtaccagattgcccactcaactggatggaactttggagtggttat
agtttcttaatgagtgcggacggtaagaaaggtgctggtcagcagctgtcatcccccggt
tcatgcttagagactttccaacatattccttttattgagtgtcacggaagaggaacttgt
aactatttcacttcatccctatcgttctggttaagctccattgacgaaagtcatatgttt
aaaaagcccaaaaacgagacatttaaaggagaagcttacctaaggaaagttagtcgctgt
tcagtttgtctcagaatacagtcatcaattcaaataacaacttcgagacctgtagcaact
acagcaacaccaaccgtaccgacactggacatctctgcaagtggcgatggccttaccaca
gatgacgaagatttagttacaggaagtggggatggccaattaacctcaagcggtgactac
gaagactcagaagaagaaacaacagttgaaattgtaacttatgactggggtactgactcg
cccgtcgttcctccaagtagaaggcgaagacacaaggagaaggtgtattccacttggact
ttagacgactcagattatttagacttttaa
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integrated database retrieval system
