Artemia franciscana: 136027338
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Entry
136027338 CDS
T10524
Name
(RefSeq) cleavage stimulation factor subunit 3-like
KO
K14408
cleavage stimulation factor subunit 3
Organism
afra Artemia franciscana
Pathway
afra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136027338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afra03019
]
136027338
Messenger RNA biogenesis [BR:
afra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
136027338
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
NRDE-2
Motif
Other DBs
NCBI-GeneID:
136027338
NCBI-ProteinID:
XP_065560553
LinkDB
All DBs
Position
5:complement(36062883..36107355)
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AA seq
709 aa
AA seq
DB search
MTEKLNRAYRSLDDNPYNLDAWNQLIRDACLSKIDEARPIFEKLIATFPTCGRYWKTYIE
QEMKARNFDKVEKLFQRSLLKVLNIDLWKCYVNYVKDTKASTPNYKERMAQAYDFALDKM
GMDMHAQSLWMDYITFLKGVEAVGSFAENQRIAAVRKVFQRAIVTPIIGVEVLWKEYVSF
EQSINTLIAEKMTMERAKDHMNARRVAKELEALTRGLNRHSPSLPPSGTAEEAKQVDLWK
KYLSWEKANPLGTEDKILLTRRVMFAYEQCLLVLSHHPDIWYEATLFLEQSAKIMNEKGD
VTSSKLFSNEVANMFERCTGGILKNCSLLHFAYADFEESRLQYEKVHQIYQKLIDIRDVD
PTLAYIQQMKFARRAEGIKSARAVFKKAREDQRSSYNVFVAAALMEYYCSKDKNVAFKIF
ELGLKKYSDDPEYLVAYVDYLSHLNEDNNTRVLFERILSSPSLSSQKSIEIWNRFLEFEA
NIGDLSSIVKVEKRRAQVLEQLQEYEGRETAYLVDRYKFANLYPCSDEELRVIRYPEVSK
GLSISFGVRRMNTLGLGLNKKAIINDGYPKPDLNQLVPFKPVREWKPNHGTIPGGAFPYP
AAVQQTLLLLPPPDSFHGPFAIVDKLMDTIMNMTISEEYKPGREEEGVSTKLFDLAKSVH
WVEENGKEEKTKRKKVAKTRNDSEEEEEGHKIPSYDIFRIRQQKKVKKL
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgactgagaaattaaacagagcttacaggagtttggatgataatccatacaatcttgac
gcctggaatcaactaattcgagatgcttgcctttctaaaattgacgaagcacgacctata
tttgaaaaactcattgccactttccccacatgcgggaggtattggaaaacatacattgaa
caagagatgaaagctcgaaattttgacaaggttgaaaagctttttcaacgaagtctgctc
aaagtcctcaacattgatttatggaagtgctatgtaaactacgttaaagacacaaaggct
tcaacgcctaactacaaagaaaggatggctcaggcttatgactttgctcttgacaaaatg
ggaatggatatgcatgcccaatctctttggatggactatatcacatttttaaaaggagtt
gaagctgttggaagttttgctgaaaatcaaaggattgcagcagtacggaaggtatttcaa
agagcgattgttacaccaatcataggtgttgaggtactctggaaagaatatgtatcattt
gaacaaagcatcaacactcttattgctgaaaaaatgacaatggaaagagccaaagaccat
atgaatgcaagacgtgtagctaaagagttggaggctttgactcggggactaaataggcat
tctccaagtttgcctcccagtggaacggctgaggaagcaaaacaggttgacctctggaag
aaatacttgtcgtgggagaaagccaaccctctgggaactgaggataaaatcttgctaaca
aggcgtgtgatgtttgcttatgagcagtgtcttcttgtcctcagccaccatcctgatatc
tggtatgaggccactttatttttggaacagagtgcaaagattatgaatgaaaagggagat
gtcacctcatccaaactctttagtaatgaagttgcaaacatgtttgagagatgtactggt
ggcattttgaaaaactgttctttacttcattttgcctatgccgactttgaagaaagtcga
cttcaatatgaaaaggttcatcaaatttaccagaagctaattgatatcagagatgtcgat
cccacactagcgtatatacaacagatgaaattcgcacgacgtgctgaagggatcaaatct
gcgcgagctgttttcaagaaagcgcgcgaagatcaacgttctagctataatgtctttgtt
gctgctgctctgatggaatactattgcagcaaggataagaatgtagctttcaaaatattt
gaacttggcttgaaaaagtattctgatgacccggagtacctggttgcttatgtagattac
ctatcacacctaaacgaggacaacaacacccgggtgctttttgaaaggatcctgagttcg
ccaagtctttccagccaaaagtccattgaaatctggaatcgtttcttggaattcgaagct
aatattggggacttgtcaagtatagtcaaagttgaaaagcgaagagcacaagtgcttgag
cagcttcaagaatatgagggacgtgaaacggcatatttggttgatagatataaatttgca
aatttgtatccatgttcagatgaagaattaagggttattcgttacccggaagtttcgaaa
ggactaagcatatcatttggcgtacgaaggatgaacaccttgggcttgggactgaataag
aaggcaattattaacgatggctatccaaaacctgatctgaatcaattggtgccttttaag
cctgtaagagaatggaaaccgaaccatggaacaatacctggtggtgcttttccttacccg
gctgcagtacagcagactttgttactcttgccaccgccggattcattccatggcccattt
gctattgttgacaaacttatggacaccataatgaatatgacgatttctgaagaatataaa
cctggtagagaagaagaaggggtatcgacaaagctttttgatcttgccaagtcagttcat
tgggtggaagagaatggaaaagaagagaaaactaagaggaagaaagtagcaaagacaagg
aatgactctgaagaagaggaagaaggtcacaaaattccatcatatgacatttttaggatt
cgacaacaaaagaaagtaaaaaagctttga
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