Artemia franciscana: 136027388
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Entry
136027388 CDS
T10524
Name
(RefSeq) ATP-dependent RNA helicase DHX8-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
afra Artemia franciscana
Pathway
afra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136027388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afra03041
]
136027388
Enzymes [BR:
afra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
136027388
Spliceosome [BR:
afra03041
]
Complex C
Other components
Step II factors
136027388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
GIPC1_GH2
Flavi_DEAD
nSTAND3
AAA_16
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
136027388
NCBI-ProteinID:
XP_065560651
LinkDB
All DBs
Position
5:complement(39346409..39419973)
Genome browser
AA seq
1202 aa
AA seq
DB search
MEDLKKLEHLSLVSKICTELENHLGLNDKDLAEFMIHLVEKHRTPEKVKKVLLKKGVELS
DSLTSTIVRLVNHMKSKEDENTEVKPAIVADNKSKMKEMFPFLALADKSLIVECEEKKDI
KPEESSVDDMMKALEAMAPNIESISDKKGRERSRSRERRSRSRSRERSKRDRSRERKKKR
ARSREKRSRSKEPHGRDRDYRRRNSRSPRRRDRSTERRYNRDRSTERRRSRDRGTRDVFV
EKPPENAEIGLIYTGKVTNLVPFGCFVQLEGLRRRTEGLVHISQLRSTGRVNEVSDVVTK
GQKVKVKVLSVASNKISLSMKDVDQESGRDLNPMVAKTDTEIEEERLRNPDRPFTAFEFE
EVEEELEPKRRRVQRVASPERWELSQMLKARAIDQTELPDFDEELGILPKDESDDEDIEI
EIVEEEPEFLRGHGRHLQELSPVRIVKNPDGSLAQAAMMQGALSKERREQKMQARDSEAA
EQPQGPRRNWNDPVPDMEPQERMSRGIGGPPSQDLPEWKRHIIGGFKGVPMGKKTNMTIL
EQRQSLPIYKLKDELVKAVFDNQILIVIGETGSGKTTQITQYLAEAGLSARGKIGCTQPR
RVAAMSVAKRVSEEFGCRLGQEVGYTIRFEDCTSNETIIKYMTDGMLLRECLIDATMSSY
SCIMLDEAHERTIHTDVLFGLLKAAVKKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPG
RTFPVEILYTREPETDYLDASLITVMQIHLNEPPGDVLLFLTGQEEIDTACEILFERMKS
LGPDVPELIILPVYSALPSEMQSRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGF
VKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKCYRLYTERAYRDEMLPTPVPE
IQRTNLASTVLQLKAMGINDLINFDFMDAPPVESLIMAMELLHSLSALDDEGLLTRLGRR
MAEFPLEPNLAKILIMSVHLMCSDEILTVVSMLSVQNVFYRPKEKQELADQKKAKFNQPE
GDHLTLLAVYNSWKNNKFSNAWCYENFIQIRTLKRAQDVRKQLLGIMDRHKLDVVSCGKN
TAKVQKAICSGFFRNAAKKDPQEGYRTLVDSQNVYIHPSSALFNRQPEWVVYHELVQTTK
EYMREVTTIDPKWLVEFAPAFFRFSDPTKLSKFKRNQRLEPLYNKYEEPNSWRISRIRRR
RN
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atggaggatttaaagaaacttgaacatttatctttagtatcgaagatctgcacagagctt
gaaaaccatctagggctaaatgataaggatcttgctgaatttatgatacatttggtggaa
aagcacaggacaccagaaaaagtaaagaaagtcctcttgaaaaaaggagttgagctctca
gactccctcacttcaacaattgtaagattagttaatcatatgaaatcaaaagaggatgaa
aatactgaagttaaacctgccatagttgccgataacaaatcgaagatgaaagagatgttc
ccttttcttgcacttgcagacaaatccctaatagtagaatgtgaagaaaagaaagacata
aaacctgaggaatcttctgttgatgatatgatgaaggccttagaagcaatggctccaaat
attgaatctatttcagataaaaaagggagagaacgtagtcgtagtagagaaaggcgaagt
cgaagtagaagccgtgagcggagtaaacgtgacagaagcagagagagaaaaaagaaaaga
gcaagaagtagagaaaaaagatcaaggagtaaggaaccgcatggcagggatagagattac
agaaggaggaatagtagatccccaaggagacgagatcgctcaacagagagacggtacaac
agagatcgttcaacagagagaaggcgtagcagagatcgagggactcgtgacgtgtttgtt
gaaaagccccccgaaaatgctgaaattggtctcatctacactggaaaagtaacaaacctt
gttccatttggctgttttgtgcaacttgaaggattacgccgaagaacggaagggcttgtt
cacatctcgcagcttcgaagtactggacgggttaatgaagtaagtgatgttgtgactaaa
ggacaaaaagttaaagtcaaagtgttatcagttgcaagtaataagatttcattatcaatg
aaagatgtagatcaagagtcagggcgagatttgaatcctatggtggcaaagacagataca
gaaattgaggaagaaaggttgagaaacccggatcgaccctttacagcttttgaatttgaa
gaagtagaagaagaactggagccaaagcggagacgagtgcaacgggttgcatcacctgaa
agatgggagctaagtcagatgctaaaagccagggcaattgatcaaacagaacttcctgat
tttgatgaagagcttggtatattacctaaggacgaaagtgatgatgaagatattgagatc
gaaattgttgaagaggagccagaatttttaagaggacatggccgtcacttgcaagagtta
agtcctgttcgaatagttaaaaatccagatggctccctcgcacaggctgctatgatgcaa
ggagcactgtctaaagaaagaagggagcagaaaatgcaggcaagggacagtgaagctgcg
gaacagcctcaaggaccaaggagaaactggaacgaccctgtcccggatatggaaccacag
gaaagaatgtctcggggaattggtggacctccgtctcaggatttgcccgaatggaaacgt
catataattggcggttttaagggagttcctatggggaagaagaccaatatgactattttg
gagcagagacagagtcttcccatctacaaactcaaagatgaactagtcaaagcggtattt
gataatcagatccttatagtaattggtgaaactggatcggggaagacgacgcagattacg
cagtatcttgcagaggctggtctcagcgctcgcggtaaaataggatgcactcagcctagg
agagttgctgccatgtcagttgccaaaagagtgtccgaagaatttggatgtcgccttggt
caagaagtaggctacactattcgttttgaagattgtacaagtaatgagactatcatcaaa
tacatgactgatggtatgctgctcagagaatgtttgattgatgctacaatgtcctcttac
tcgtgcattatgttggacgaagctcatgaaaggactattcacacagatgtcctctttggt
cttttgaaagcggcagtaaagaaaagacccgaactcaaactgattgttacatctgccact
ctagatgcagtgaagttttcacaatatttttttgaagcgccgattttcacaattcctgga
cgaactttcccagtagaaatcctgtatactagagagccagaaacggattatttagatgcc
tccctcattactgtgatgcagattcatctgaacgagccaccaggtgatgtattgctattt
ttgacgggtcaggaagaaattgatacagcttgtgaaattttatttgaaagaatgaaatca
ctaggaccggatgtacctgaattgattattttgcccgtatattcagcattgcctagtgaa
atgcaatctaggatttttgaccctgcccctcctggctccagaaaggtagttattgcaaca
aacattgctgaaacttctttaacaattgacgggatttattacgtggttgatccaggattt
gtgaaacaaaaggtgtataactccaagaccggtatggactcattggttgtgacacctatc
tcacaagcagccgccaaacagagagctggtcgtgcaggtagaactggacctgggaaatgt
taccgactttatacggaaagggcttaccgagacgaaatgcttccgacaccagtacctgaa
attcagagaaccaatttggcctcaacagtcttacaattgaaagccatggggatcaatgat
ttgataaatttcgatttcatggacgcaccgcctgtggagagtttgattatggccatggaa
ctacttcattctcttagtgcattggatgatgaaggtttacttaccagactgggaagaagg
atggcagagtttccattggagcctaatttagccaaaatcttgattatgtcggttcatttg
atgtgctcagacgaaattttaactgttgtgtctatgctttctgtgcaaaacgtcttctac
aggccaaaagaaaagcaagaactggctgaccagaaaaaagccaaattcaatcagcctgaa
ggtgaccatctcacccttcttgccgtatacaattcatggaaaaacaacaaattttcaaat
gcatggtgctatgaaaacttcattcagatccggactttaaaaagagcccaggatgttcga
aaacagcttttgggaataatggatagacataagttggatgttgtctcctgtggtaaaaat
acagcgaaagtgcagaaggctatctgttctggattcttccgtaatgcagccaaaaaggac
ccccaagaaggctataggacattggttgatagtcaaaatgtctacattcatccttctagt
gctctttttaatagacagcctgaatgggttgtctaccacgaactggtgcaaacaacaaag
gagtatatgagggaagtgacaacaatagacccaaaatggctggtcgaattcgctcccgct
tttttccgattctctgacccaaccaagttaagcaaattcaaaagaaatcaaaggcttgaa
cctctatataataaatatgaagagcccaattcttggaggatatctcggatcaggagacga
agaaattga
DBGET
integrated database retrieval system
