Artemia franciscana: 136027506
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Entry
136027506 CDS
T10524
Name
(RefSeq) exosome complex component CSL4-like
KO
K07573
exosome complex component CSL4
Organism
afra Artemia franciscana
Pathway
afra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136027506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afra03019
]
136027506
Messenger RNA biogenesis [BR:
afra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
136027506
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
136027506
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Ortholog
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GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
ECR1_N_2
TRAM
CEP76-C2
Motif
Other DBs
NCBI-GeneID:
136027506
NCBI-ProteinID:
XP_065560892
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All DBs
Position
5:47224582..47254328
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AA seq
201 aa
AA seq
DB search
MEKDLICVPGQALAKSSDKIQAGSGTYLRHGYIYSSLVGKVHLTKGPVTDTHVVEVFSGK
ELTVVPSPGDVVTVRISQVTQRYAKCQILCIRDVELSESFSGLLRKEDVQAEQKDKVEMY
KSFRPGDIVLSKVVSIGDSQSYLLTTAEDELGVVIAYGEGGVPMVAIGWQEMQCPKTFQK
ENRKVAKVVSELFEFEESVDK
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggatttaatttgtgttccaggccaagctttagctaaaagcagtgataagata
caagctgggagtggtacatacctaagacatggatacatttactcaagtctggttggaaaa
gtccatctaacgaaaggtcctgtaactgatacccatgttgtggaagtatttagtggtaag
gaattgactgtggttccaagtcctggggatgttgttacagttagaatatcacaagtgact
caaagatatgcaaaatgtcaaattctctgcatccgagatgtggagctgtccgaatcattc
agtggtcttttaagaaaagaagatgttcaggctgagcaaaaagataaggtggaaatgtac
aagagttttagacccggagatattgttctttccaaagtggtttcaattggagattcacaa
tcttatttactaacgacagcggaagatgaattgggtgttgtcatcgcatatggagaagga
ggtgttcctatggttgctattggttggcaagaaatgcagtgcccgaaaaccttccagaaa
gaaaatcgcaaagtagccaaagttgttagtgaactctttgaatttgaagaatctgtcgat
aaatga
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