Artemia franciscana: 136028274
Help
Entry
136028274 CDS
T10524
Name
(RefSeq) superkiller complex protein 2-like
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
afra Artemia franciscana
Pathway
afra03018
RNA degradation
Brite
Enzymes [BR:
afra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
136028274
Messenger RNA biogenesis [BR:
afra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
136028274
mRNA degradation factors
3'-5' decay
Ski complex
136028274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136028274
NCBI-ProteinID:
XP_065562085
LinkDB
All DBs
Position
6:complement(27902159..27906354)
Genome browser
AA seq
1154 aa
AA seq
DB search
MNMQPNFFDILKFSNKWQTNKLYSIPVYKMPRELKIKYDPTTGRAMDVFEVAKSESFARQ
SKPGLFNEPVRDNVNATPNDLKTDAKTGGKSVALDFDHLLTVPPGFENGMEFELTTLVKS
IQNKYKSQEESEMEKTAGIIRNIATEGKIKDSKDSKLHLALPKIPKESPTLWAETVDVSE
AVDFDSMVPNPAFKWKFELDSFQKHAIIKLEKGENVLIAAHTSAGKTVVAEYAIALSQRH
MTKTFYTSPIKALSNQKFRDFRSTFQDVGIITGDVQINPKASCIIMTTEILRSMLYNGQS
SVQDLEWVIFDEVHYMNDSERGVVYEEVLVLLPEHVRIIMLSATVPNTLEFASWVGKTKK
RKMCVISTPKRPVPLEHYLYTGQSRKSKEHKFLILGAEGTLVHKGYLDAVEAKKPKEKAP
AQQKDTGKRALGGGKRSCDQRYNEKEGNKVKKVIAIAPHASKSGPQHQKNLWIRVLDHLC
SEDKLPVICFTLSRSKCDSNANSLSSVDLTTAEEKHAISQFLHKCLDILKGPDKNLPQVI
QMSSLLKRGIGVHHSGILPILKEVVEMLFQDGKVKLLFATETFAMGINMPARSVVFDDIM
KHDDKGRRQLLPSEYIQMAGRAGRRGLDSTGTVLILCKDSVPELESLHKMMLGKPQKLES
QFRVTYSMILNLLRGKQLRVQDMMKLSFGEVHFRSKIEELEKEMKQRENPPKLDCSTCSD
VESFYEAARKYLEKKVEVYRHVLHPQAIKALKPGRFLTVVDDECVLKLGLLLDVNTHSKE
PIFKTLVLRGSKKTKRENSMKKIDKTRPKSALTPKMVALVKNTYFVPHVRDSDVLSLKLD
DIADVTDFTLKTDCKVVLSDWKTKSKEDSPCSVFDKAVDALLRMSKDPNFNYLNLVEHLK
QKTLDMVEQLQELQKLKPKYDDFKCCLCSSFYEHLDFTTQEREEYDRLNYLTSDERLGNS
TEYAAKLNVLKSFKYVNSDSMVQLKGHVACSIGKQELMLTELLFRNILTDLPEEDIAALL
SCLVFNQKPEKEPNLTPSQKETIDSIQKVARDIGKTQKKCGLQEHVEDYVDQFQFGLVEV
IYKWTMGVSFREIMELTDVQEGTIVRVIQQLVETLQDLRKAAQILGNPTLETKLEAASTK
IKRDIVFQGSLYLQ
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgcaacccaatttttttgacattcttaaattcagcaacaagtggcaaacaaac
aagctttacagtatccctgtttataaaatgccaagagaattgaagataaaatatgacccg
acgactggtagagcaatggatgtttttgaagtcgcaaaatctgaatcatttgctcgacaa
agtaaacctggccttttcaatgaacctgtaagagacaatgtaaacgctacgccaaatgat
ttaaaaactgatgcgaaaacaggtgggaaatcagtggctctcgattttgatcatttatta
acagtaccaccgggctttgaaaacggcatggaatttgaattgactactttagtgaaatct
attcaaaataagtataaatctcaagaagaatctgagatggaaaaaacagccggtattatc
aggaatatagcgacggaaggtaaaattaaagattcaaaagattcaaaacttcacctggca
cttccgaaaattcctaaagaaagcccaacattatgggctgaaaccgttgatgtcagcgaa
gctgttgattttgacagtatggttccaaaccctgcattcaaatggaagtttgagcttgac
agctttcagaaacatgctattattaaattggagaaaggtgaaaatgttcttatcgctgca
catacatccgcagggaaaacagtagttgctgagtatgctatagctttatctcagaggcat
atgacgaagacattttacacttcaccaatcaaagccttgtccaaccagaaatttagagac
tttagaagtacttttcaagacgtcgggattataacaggagatgtccagatcaatccaaag
gcaagttgtattataatgacgaccgagattttaagatccatgttgtataatggacaaagt
tcagttcaagacctagaatgggtcatatttgatgaagttcattacatgaacgattctgaa
cgaggtgtcgtatatgaagaagtcttagttcttttgccagaacacgtgagaatcattatg
ttgagtgctactgttcctaacaccttggaattcgcgtcatgggtcggcaagacgaagaaa
agaaagatgtgtgttattagcaccccaaagaggcctgtacctttggaacattatttatat
acgggacaatctaggaaatcaaaggagcataaattccttattttgggagctgagggaact
ctagtgcacaaaggctatttagatgctgtagaagcaaagaaaccgaaagagaaagcccct
gctcaacagaaagacactggaaaaagggctctcggaggaggtaaacgaagttgtgatcaa
agatacaatgaaaaagaaggcaataaggttaaaaaggtcatagctattgctcctcatgct
tcaaaatcgggcccacagcaccaaaagaacctttggattcgagtacttgatcatctttgt
tctgaagataagctccctgttatttgttttactttgtcaaggagcaaatgcgattcaaat
gcaaattcgttgagttctgtcgacctaacaacggcagaagaaaaacatgctatttctcag
ttcttgcacaaatgcctggacatactcaaaggcccagataaaaatcttccacaagttata
caaatgtcaagtctgttaaagcgaggaatcggtgtccatcacagtggaatattgccaatt
ttaaaagaagttgttgaaatgctgttccaagatgggaaggttaagctgctctttgcaact
gaaacttttgcaatgggaataaatatgcctgctcgctcagtagtttttgacgatatcatg
aaacatgacgacaaaggtcgaagacaattgctaccctctgaatatatccagatggctgga
cgtgctggaagacgaggtttagactctactggcactgttctaatattatgtaaagatagt
gtgccagaattggaaagtcttcataaaatgatgctcggaaaacctcaaaaattagaatcg
cagtttcgtgtcacttattcgatgatattgaatttattgaggggaaaacaattaagagtt
caagacatgatgaaactaagctttggggaggttcatttccgctcaaaaattgaagaactt
gaaaaggaaatgaaacaaagagaaaaccctccaaaactggactgtagtacttgctcagat
gtcgaaagcttttatgaggctgctaggaagtatctagaaaaaaaagttgaagtgtatagg
catgttttacacccccaagcaattaaggcattgaaacctggacgttttttaacagttgtc
gatgatgaatgtgttttaaaacttggtctccttcttgatgtcaatacacattctaaagag
ccaatttttaagactttagtccttcgtggaagcaaaaaaacaaagagagaaaactcaatg
aaaaaaatagataaaacgagaccaaaatctgccctaacaccaaaaatggtagcccttgta
aaaaatacatattttgttccacatgttcgggacagtgacgttttatctttgaagttagat
gacatagcagatgttactgactttaccctaaaaacagattgcaaggtcgtattaagtgac
tggaaaacaaaatcgaaggaagattctccttgttctgtatttgataaagcagttgacgcc
ttgttaaggatgtcaaaagatcccaacttcaattatcttaatctggtagaacatttgaaa
cagaaaaccttggacatggttgagcaattgcaggagctgcaaaaactcaaaccaaaatat
gacgatttcaagtgttgcttgtgctcatctttttatgagcatttggatttcacaacgcaa
gagcgagaagaatacgatcggctgaattacctcacttcggacgagcgtcttggaaattca
acagaatatgctgcaaaactgaatgtattgaaatctttcaagtatgttaattcggatagc
atggttcaactgaagggacacgtagcgtgcagcattggaaaacaagaattaatgctgact
gagttattattccgcaacattttgacagatttaccagaagaagatattgcagcattacta
tcatgtttagttttcaatcaaaaacctgagaaggagccaaacctaactccttctcaaaag
gaaactatagatagcattcaaaaggtagcgagggatattggtaaaactcaaaaaaaatgc
ggtttacaagaacatgttgaagactatgttgatcagtttcaatttggcctagttgaggtg
atttataaatggacgatgggtgtgtcatttagagaaattatggaactgactgacgtccag
gaaggcacgatagtaagagtgatacagcaactcgtagagactttacaagatctccgtaaa
gccgctcaaattcttggtaatccaacacttgaaactaagctggaggctgcttcaacgaaa
ataaagcgtgatatcgttttccaaggcagtctatatttacagtga
DBGET
integrated database retrieval system
