Artemia franciscana: 136029305
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Entry
136029305 CDS
T10524
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
afra Artemia franciscana
Pathway
afra03018
RNA degradation
afra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136029305
09123 Folding, sorting and degradation
03018 RNA degradation
136029305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afra03019
]
136029305
03041 Spliceosome [BR:
afra03041
]
136029305
Messenger RNA biogenesis [BR:
afra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
136029305
mRNA degradation factors
5'-3' decay
Lsm complex
136029305
Spliceosome [BR:
afra03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
136029305
Complex C
U2 snRNP components
136029305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
136029305
NCBI-ProteinID:
XP_065563643
LinkDB
All DBs
Position
7:complement(40927078..40937389)
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AA seq
93 aa
AA seq
DB search
MLFFSFFKSLVGKDVVIELKNDLCICGTLHSVDQYLNLKLTDIAVTDPDKHPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKESSKK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgttatttttttcatttttcaaatctctggttggaaaagatgtagtcattgagctgaaa
aatgatctttgcatatgtggaacgctccactctgtagaccaatatttaaatctgaagcta
actgatattgcagttactgatccagataaacatccacatatgctttccgttaagaactgc
ttcattcgaggttcagtagtaagatatgtccaattaccagctgacgaagtagatacacaa
ttactacaagatgcagcaagaaaagaatcgtccaaaaaatga
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