Artemia franciscana: 136030562
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Entry
136030562 CDS
T10524
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
afra Artemia franciscana
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afra03019
]
136030562
Messenger RNA biogenesis [BR:
afra03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
136030562
3'-5' decay
Other 3'-5' decay factors
136030562
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
ResIII
AAA_19
PhoH
zf-CCCH
UvrD-helicase
AAA_22
nSTAND_NTPase5
AAA_16
Motif
Other DBs
NCBI-GeneID:
136030562
NCBI-ProteinID:
XP_065565695
LinkDB
All DBs
Position
8:52966298..53064866
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AA seq
1161 aa
AA seq
DB search
MLGPVVSSTFQGPEGRSLPRGVAFADLAICAQYLSMGFCRLGDQCAKAHSVDELEHWKSQ
YQIKMVHLKDQSIAQKLKARMSDENEGIVLHNEIAGVIITCDKALIVSSESRPCSMEWVF
VVESDKVLQAVFFFAEGSSEYYSISAVESPEGKNTPKSIEWVNRFPNQICGIISYVITIV
FESDIYGTFRQELVFDFGNNQYVTKKMCLDILCGNAGIELEQVERTIWSDSIRWDYSNSK
IIEFDDKEKLTKAEEFLMKHYPPPNPENFRPTQAVNEPKFTPNNYKERMKVLVTIEELEQ
QKVISKFNICSMLAICSSYMLTPGIDCVTKYSREGELFAVMHLTGDLSGDTAAGRLVLSS
CNQVLLKIVGDKIPEEERPVVYEAIIEDKLKEYVYLRLSKSLVSDFKLKIEEPVTAEVQF
QLNRLPFCERLFANDRVYIEHVCPSAYCDIPLSAPATGNYEKLNQRQRQAVEAITAPLSD
RIPVVTLVGPFGTGKTFTFAEAIKALADFPENRVLVCTYSNSAADLYIRYHLHPYVKAGN
AHARPLRIYYHQRWLNSVHDDVLEYSLYDPEVRMFRYPTREELENSRIIVTTLSLSRKLL
EVGLPRGFFTHILIDEAAQCLEADALISLSLANERTRIALAGDYMQLSPTVYSALAKEKG
FHVSLLERLYNFYSEGFPCRILLVENYRSHPAIVDFTSTLFYNGRLQSSGNALRHPDIYP
LAFYTAVGKDVQDSNSTAYYNLAEVYEVVERVVSLKEKWPACWGEFNESSIGVVSPYADQ
VFRIRGELRRRQLHGISVERIVNVQGKEYRVIIMSTVRTRLTTRMPRTDRQANLVVLADE
DYGLLSDERLVNAALTRAQSLVITVGDPIALCAIGRCRKLWEKYIHTCERNGSFFGMQSR
WLRFELDAVDLQILYGLNPLAPIFVPGRTWRPFENRSYYDVDNVLHHLRPVYLIQPIYGV
APVRLPVEGAPLIAMPHRLQMPSRLPPATSVPFNPLLSRSRSLLGQPVTAQHGMNHLNFE
SINRQAQFHMQKLLQLQAMQAQMQRGLYPHVASRMPLQQASSEPTRTGFPPGFSPQNTAS
PSRLNTSSSPRLITVEELEASLLSMDVSAEMKGRISDSRVESRASTGNGNNSDPHFENGV
FICNGDTALDGSLEGSDQEDT
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgcttgggccggttgtttcatctaccttccagggtccagaaggtagatcacttccacgt
ggagttgcttttgctgatttagcaatatgtgctcagtatttgtctatgggtttctgccgt
ctaggtgatcagtgtgccaaagcacattcagttgatgagctagaacactggaaatcacag
tatcaaatcaaaatggtgcatttaaaggatcaatcaatagcccaaaagcttaaagctcga
atgagtgatgaaaatgaaggaattgttttgcacaatgaaattgcgggtgtaattattact
tgtgataaagctttgattgtttcgtctgaatccagaccatgctctatggagtgggttttt
gtagtagaaagtgataaggtgttacaggccgttttcttttttgctgaaggtagttctgag
tattattctatcagtgctgttgaaagtccagaaggaaaaaatactccaaagtcaattgag
tgggtaaaccgttttcctaatcaaatttgtggaattatcagctatgtaattaccatagtt
tttgagtcagatatttatggtacttttcggcaggagcttgtatttgattttggtaataat
caatatgtaacaaaaaaaatgtgtcttgatattttatgtggtaacgctggcatcgaactt
gaacaagttgagagaactatatggagtgattcgatacgatgggattattcgaattcaaaa
attattgaatttgatgataaagaaaaactcaccaaggcagaagagttcttgatgaaacac
tatccaccaccgaaccctgagaattttcgacctacacaagctgtgaatgaaccaaaattc
actcctaataactataaagagaggatgaaagttctagtaacaattgaagagcttgaacaa
caaaaggtaatatccaagttcaatatttgctcaatgttggcgatttgtagtagttatatg
cttacccctggtatagactgtgtaacaaaatattctagagagggggagctctttgctgta
atgcatcttactggagatttatctggagatactgctgctggccgtttggtactgagtagc
tgtaatcaagtcctcctcaaaattgttggtgataaaataccagaagaagaacgtcctgtt
gtctatgaagctattatagaagataaattaaaagagtatgtttatttaagactatccaaa
agcttggtgagtgactttaaattgaagatagaagagccagtgacggcagaggttcagttt
cagttaaataggcttcctttctgcgaaaggctttttgcaaatgatcgtgtatatattgaa
catgtttgcccctctgcatattgtgacattcctttgtccgctccagctactggaaattat
gaaaagctgaatcaaaggcagcggcaagcagtggaagcaatcacagcgccattgagcgat
cggattcctgtagttactttagtaggaccctttggaactggaaaaacttttacatttgct
gaagccattaaagccctcgcagactttccagaaaaccgtgtgcttgtgtgtacttactcc
aatagcgctgcagacctgtatataaggtatcaccttcatccctatgttaaagctggaaat
gcccacgctcgacctttgaggatatactatcatcagcgctggctgaattctgtccatgat
gatgtcttagagtatagtctttatgatccggaagttcgaatgttccggtatccaacacga
gaagagttagaaaattcaagaatcattgtcaccacgctcagcttgtcgagaaaactcctt
gaagttggattgccaagagggtttttcacccacatcttaattgatgaggcagcgcagtgt
ttagaagcagatgcgctgatatcgttgagtttagcaaacgagaggactcgaattgcttta
gctggtgattatatgcagctttctccaacagtgtattcagcgttggccaaagagaagggg
ttccacgtgtcccttcttgaaaggctgtacaatttctattctgagggtttcccttgtcgg
atcctgttagttgaaaactaccgatcacatccagcaattgttgactttacatctacactg
ttttacaatggtcgtttacaaagtagtggcaacgcgctcagacaccctgatatttaccct
ctggctttttacacagctgttggcaaagatgtacaggatagcaatagtactgcgtattat
aacttagccgaagtatacgaggtagttgaaagggttgtgtctctcaaagaaaaatggcct
gcgtgctggggagaatttaatgaatctagcattggcgttgtctcgccatatgctgatcag
gtgttcagaatacgtggagagctaagacgtcgtcagctacacggaatatcagtagaacgc
atcgtaaacgttcaagggaaagaatatcgtgtaataataatgagcacagtaagaacacga
ctgactactcgtatgcctcgtacggatagacaagcgaatttagttgtattggcagatgaa
gattatggactcctctctgatgaacgtcttgttaatgctgctttaactcgagcacagagt
cttgtaatcaccgttggtgatccgattgcgctttgtgctattggaagatgcaggaaacta
tgggaaaaatacatacatacttgtgaaaggaatggctctttctttgggatgcaaagtcgt
tggcttcgctttgaattagatgctgtggatctccagatactttatggcttaaatcctctt
gctccaatttttgttccagggcggacttggcgcccctttgaaaacagatcttactatgat
gtggacaatgttttgcatcacttgcgtccggtatatttgattcagccaatctacggagtg
gcacctgtcagactcccagtggaaggagctccactcattgcaatgccacaccgtttacaa
atgccttctcgtctgccaccagctacgtctgttccatttaatccattgttaagtcgaagt
cgttcccttctgggtcagccagtgaccgcgcagcatgggatgaatcatttgaattttgag
tccatcaatagacaagctcagtttcatatgcagaagcttttgcaactccaggctatgcag
gctcagatgcagcgagggttatatccacatgtagcaagtcgtatgccactgcagcaagcg
tcgagtgaacccacaagaaccgggtttccaccgggtttttctcctcaaaatacagcctct
ccgtctagactgaatacatcctcatcgcccaggcttattactgtagaagaactggaagca
tcacttttatccatggatgtatctgccgaaatgaagggtagaatatctgattcaagggta
gaaagtagggcaagtactgggaatggaaacaatagtgatcctcattttgaaaatggtgta
tttatttgtaatggtgatacggcattagatggaagtttggaagggagtgatcaagaagat
acttaa
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