KEGG   Artemia franciscana: 136030982
Entry
136030982         CDS       T10524                                 
Name
(RefSeq) ATP-dependent RNA helicase WM6-like
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
afra  Artemia franciscana
Pathway
afra03013  Nucleocytoplasmic transport
afra03015  mRNA surveillance pathway
afra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:afra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    136030982
  09122 Translation
   03013 Nucleocytoplasmic transport
    136030982
   03015 mRNA surveillance pathway
    136030982
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afra03019]
    136030982
   03041 Spliceosome [BR:afra03041]
    136030982
Enzymes [BR:afra01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     136030982
Messenger RNA biogenesis [BR:afra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     136030982
Spliceosome [BR:afra03041]
 Complex C
  Other components
   EJC/TREX
    136030982
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    136030982
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Cas3-like_C_2
Other DBs
NCBI-GeneID: 136030982
NCBI-ProteinID: XP_065566210
LinkDB
Position
9:complement(10159614..10215758)
AA seq 422 aa
MAEPNEDLLDYDEEEAQEQVAETEKPAKKDVKGTYTSIHSSGFRDFLLKPEILRAIVDCG
FEHPSEVQHECIPQAVLGMDVLCQAKSGMGKTAVFVLATLQQLEPVEGEVGVLVLCHTRE
LAFQIYKEYGRFSKYLNDVRVEVFFGGFEPSKDEEKLKSKPHIVVGTPGRVLALVRQKRL
NLGKLKHFVLDECDKMLEALDMRRDVQEIYRSTPHQKQVMMFSATLSKEIRPVCRKFMHD
PLEVFVDDETKLTLHGLQQHFVKLTEKEKNKKLFDLLDLLEFNQVVIFTRTVSRCEGLTL
LLKDQNFPAIAIHSGMKQEERLEKYKEFKEFRARMLVSTNIFGRGMDIERVNIVFNYDMP
ENSDTYLHRVARAGRFGTKGLAITFVSSEEDVKTLNSVQDRFDVSITPLPDEIDLSTYIE
GR
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggcagaacctaatgaagatttgcttgactatgatgaggaggaagctcaagaacaggtg
gctgaaacagaaaaacctgccaagaaagatgtcaagggaacttatacctcaatacacagc
tcaggctttagggattttctcctgaagcctgaaattttgagagccatagttgactgtgga
tttgaacatccttcagaagtgcagcatgaatgtatcccgcaggctgtgcttggcatggat
gttctatgtcaggctaaatcaggtatggggaaaacggctgtgtttgtactggcaacatta
cagcaactggaaccggttgaaggtgaagttggcgttttggttttgtgtcatacaagggag
ttggcatttcaaatctacaaggagtatggacgattttcaaaatatctcaatgatgttagg
gtagaggtcttttttggtggttttgaaccttcaaaagacgaagaaaaactgaagagtaag
cctcatattgtggtcggaacacctggtagagtcctcgcattggtcagacaaaagcgtctt
aatcttgggaagctgaaacattttgttttggatgaatgcgataaaatgctagaagccctg
gacatgcgccgagacgttcaagaaatctaccgatcgacccctcatcaaaaacaagtgatg
atgttttcagccacattgtccaaggaaattcggcctgtctgccgaaaattcatgcatgat
cctttagaggtctttgtcgatgacgaaaccaaattaactctccatggactgcagcaacat
tttgtgaaacttacagaaaaggaaaaaaacaagaaactgtttgatcttcttgacttgctg
gaatttaaccaggttgtaatattcacacgaacagtgagtcgatgtgaaggtttgacttta
cttttaaaggaccagaattttcctgccattgccatccattcgggtatgaaacaagaagag
aggcttgaaaaatacaaagaatttaaggaatttagagcgagaatgctcgtatcaaccaac
atatttggaagaggcatggacatcgaacgtgtcaacatcgtttttaattacgacatgcca
gaaaactctgacacatatcttcatcgagtggctagagctggtcgctttggaacaaagggt
ttagcgataacgtttgtcagctctgaagaagacgtcaaaactttgaattctgttcaggat
cgctttgacgtcagtatcacccccttaccagatgagattgacttatccacctatattgaa
ggtcgttga

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