Artemia franciscana: 136031053
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Entry
136031053 CDS
T10524
Name
(RefSeq) collagen alpha-1(XVIII) chain-like isoform X1
KO
K06823
collagen type XVIII alpha
Organism
afra Artemia franciscana
Brite
Exosome [BR:
afra04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
136031053
Proteoglycans [BR:
afra00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
136031053
Glycosaminoglycan binding proteins [BR:
afra00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
136031053
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136031053
NCBI-ProteinID:
XP_065566338
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Position
9:complement(15838763..16281379)
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AA seq
1180 aa
AA seq
DB search
MLWLFLKEFLKSITSFNSHNLMFFLLFWGCLVTPSSQSNTLNSLFSNFRSQDTYKEWDLI
SAITVPFVDPTTQYMETGLDAFPAFGFSIGADLKFPYRLFIPDTLPRDFSILATIKPESP
SGGFLFGVANPMDTVVLLGVEISDGGPGRQNISLIYTSGQNPTATHTIASFTVPAFTRRW
TRFAISVSGNNITLYFNCREHETIVANRQETELTFSSASTLYIAQGGPAVRRPFMGLLQE
LKISNIPKIAEVQCKNTIEESSYDFGSGDEVNDLIRLVKEIRNEERDDAVTLEGSGFLTN
GLYDDDDDGDLFSDDDYGSGDKSPGLRIPQGPPPLPPPPPNPVGLDGLDVSIIKDFLEKV
QNMKGERGEIGPPGVKGDQGVPGPPGGVLEADITRTVDRLLGEKRQGYTGDSCSCNISSV
AEDVKFKLLELIPAGPRGPPGPEGKQGPQGPKGIGGPSGEIGIKGIKGEKGDQGDQGPPG
KDALPGSKGDPGKDGLPGQPGPQGPPGPPGPPEWKPNRSYKVGPVSKEFIQGLPGSPGPK
GDRGADGLPGQKGERGDQGLRGEKGDLGIKGGKGEKGAQGNDGTPGVKGDRGFPGMDGAP
GTPGDRGKSGPKGGKGETGETGPPGPPGPGGFQCSPQVGNEAEFEGSGDSVSAYACPKGA
KGEPGNNGYPGPPGPKGEEGKTGLDGLPGSPGPPGPEGPIGPQGPEAEKGEKGRRGKRGL
KGPHGPAGTPGLNGKKGDVGLPGFPGRPGTPGYAGPKGEKGEPGSGSRGSGQKGEKGDKG
LDGRPGEPGPIGPAGPPGSVAASGERFIPVPGPPGPPGPPGQLGLIGPPGPKGEPGFDGI
GIQGPPGPPGPSGSSNRQGSTGKNHGIKGLRAALIEDFNDFSTSVFQNRDLLLKSTDSTP
EGSLAFVKDEQLLFIRIKNGWQIVQLGEIITPKSQYRPPPPPPRSRPISLPGGPSHLMDY
IEDEQEQLDSGELDDYDLKMPLRMAALNKPMTGDMNGTRAYDYLCYRQAQGARLRGTFKA
FLASHIQNLDSVVRLLDRELPVVNTKGDILFDSWSQIFDGAGGEISQNSRIYSFDGKDIL
TDSNWPTKSIWHGARQSGERATDFSCKKWKTRSSETVGLGSSLLSGKILLQEEYPCSNAH
IILCVEGTSQLYGRRKRSVSDVILSEKEYLDVLEDDHRQV
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgctatggctgtttttaaaagagtttttaaaaagcattactagttttaattctcacaat
ttaatgttctttctcctgttttggggctgcttggttactcccagttctcagtcaaacaca
ttaaacagcttattttcgaattttcgatcacaagacacatataaagaatgggacttgatc
agcgctataactgtgccatttgtcgaccctactacccagtatatggaaacaggtctggat
gcattccctgctttcgggttttcaataggagcagacttaaaatttccatatcgcttattc
attccggatactttacctagagatttttcaatacttgccacaatcaagccagaaagtcca
agtggaggctttttatttggagtagcgaaccccatggatacagtcgttcttctgggagtg
gaaattagtgatggaggtccaggtcgccaaaatataagcttgatttacacttctgggcag
aatcctactgcaactcataccatagcctcatttaccgttcctgcattcactagacgatgg
actcgttttgcgatttccgtgtccgggaacaacatcaccctctatttcaactgtagggaa
cacgaaacgatagttgcgaaccgccaagaaacagaacttacgttcagctcagcatcaact
ttatatatagcacaaggagggccagctgttagaagaccttttatgggattgctgcaagag
ctgaagatctcaaacattccgaagatagcagaagttcaatgtaaaaacactatagaggaa
tccagttacgattttgggtccggagatgaagttaatgacctaattcggcttgtaaaagag
atccggaatgaggagcgtgatgatgctgttactttggaaggttcggggtttctcacgaat
ggattgtacgacgacgatgacgatggagatctgttttcggacgatgactatggaagtggc
gacaaatctcctggactaagaattcctcaaggacctccaccgttaccacctccccctccg
aatccagttggacttgatggtttagatgtaagcataatcaaagactttctagaaaaagtt
caaaatatgaaaggagaaagaggagaaataggaccacctggtgtgaaaggagaccaaggg
gtccctggacctccaggaggtgtactagaggcggacatcactaggactgttgacagatta
cttggagaaaagcgtcagggatacaccggtgactcatgcagctgtaatatatcatctgta
gctgaagatgtcaaattcaaactccttgaactaattccagctggaccaagaggaccaccc
ggcccagaaggaaagcaaggtccacaaggacctaaaggtattggtggtccatctggagaa
ataggtataaaaggaatcaaaggagaaaagggagatcaaggtgaccaaggccctcctgga
aaagatgctcttccaggatctaaaggtgaccccggcaaagacggactaccagggcaaccg
ggaccacaaggaccgccaggaccaccagggcctccagaatggaagcctaatagatcttac
aaggttggacctgtctcaaaagagtttattcagggattaccaggaagtccagggcctaag
ggtgatagaggagctgatggtctccctggacaaaaaggtgaaagaggcgatcaaggctta
agaggtgaaaaaggagaccttggcatcaaaggaggcaaaggtgaaaaaggggcgcaaggc
aatgatggtacccctggtgtcaaaggtgacaggggatttcctggtatggatggagctcca
ggtactcctggtgacagaggaaagtcaggtcctaagggaggcaaaggtgaaacaggtgag
accggtcctcctgggccccctggacctggaggttttcagtgtagcccccaagttggtaat
gaagcagaatttgaaggttcaggtgattctgtatcagcttatgcatgtcccaaaggagca
aaaggagagccaggaaataatggatatcctggtccaccaggcccaaaaggtgaagaagga
aaaacgggattagacggtcttcctgggtctccaggtccacctggtccagaaggccctatt
gggccacaaggaccagaggcagagaagggtgaaaagggaagacggggcaaacgtggtctt
aaaggacctcatggacctgctgggacacctggattaaatggaaaaaagggagatgttggg
ttacctggatttcctggaagacctgggacccctggttatgcaggaccgaagggagaaaag
ggcgaacctggctcagggagcagaggaagtggacagaaaggggaaaagggtgacaaaggt
ttggatggaagacctggcgaacctggaccaattggaccagctggtcctcccggttctgta
gctgcttctggtgagcgatttatcccagttccagggccaccaggtcctcctggtcctccg
ggccaactggggctaattggtcctcctgggccgaaaggtgagcctggatttgatggaatt
ggaattcaaggccctcctggacctccaggcccctcagggagctcaaacagacaaggatct
actggaaaaaatcatggtattaaaggtcttcgtgctgcgctcattgaagactttaatgat
ttttccacgtcagtgttccaaaatcgagacctgcttctgaaaagtacagactcaactcca
gaagggtcgcttgcttttgttaaggatgagcagttgcttttcatcagaattaaaaatgga
tggcaaattgtgcaactgggagaaattataacacccaagtcacagtaccgacctccacca
ccaccaccacgatctcgacccatctctctgcctggagggccaagtcatttgatggactat
attgaagatgaacaagagcagcttgattcaggagaactggacgattatgatttaaaaatg
ccgttaagaatggctgccttgaacaagcctatgacgggtgatatgaatggaacaagggct
tatgactacttatgttatcgacaagcacaaggagctagacttcggggaacttttaaggct
ttcttagcatctcacatccagaatttagattcagtcgtcagacttctagatagagaacta
cccgttgtaaatacaaagggcgacatattgtttgattcatggagtcaaatctttgatggt
gccggtggagaaatcagtcaaaattcacgtatttacagctttgatggaaaagacattctc
accgattcaaactggccaacaaaatctatttggcatggtgccagacagtcgggagagaga
gcaaccgacttttcctgcaagaaatggaaaacaagaagctccgaaacagtaggactgggc
tcatccctactcagtgggaagattttgttgcaagaagaatacccatgcagtaatgcccat
attatactttgtgttgaagggactagtcaactatatggtaggagaaaacgaagcgttagt
gatgttatattaagtgaaaaggaataccttgatgttttagaagatgaccatagacaagtg
taa
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