Artemia franciscana: 136031175
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Entry
136031175 CDS
T10524
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
afra Artemia franciscana
Pathway
afra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136031175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afra03041
]
136031175
03009 Ribosome biogenesis [BR:
afra03009
]
136031175
Enzymes [BR:
afra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
136031175
Spliceosome [BR:
afra03041
]
Complex A
U1 snRNP components
U1 related factors
136031175
Complex B
136031175
Ribosome biogenesis [BR:
afra03009
]
Eukaryotic type
Pre-60S particles
Helicases
136031175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Utp25_C
Cas_NE0113
KH_SLS1_1
Motif
Other DBs
NCBI-GeneID:
136031175
NCBI-ProteinID:
XP_065566601
LinkDB
All DBs
Position
9:complement(24155160..24158624)
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AA seq
513 aa
AA seq
DB search
MSTTYLKQSYTRRQGDSAGGYYPRFKESFNRRFEYYDNSGVNSFKPKQITGSSESYQKHV
YSPHSDIVKRSKEDIECYRASNEILVEGDDVPRPITSFKEAGFPDYLQSQLASQGFDSPT
PIQAQGWPIALSGRNMVGVASTGSGKTLAFVLPSIVHIKHINAKEARGNGPIALVLAPTR
ELAQQIKVVADKYGEPSRIRSACVYGGSPKGPQLRDLERAELCIATPGRMNDFLEARETN
LRQCTYLVLDEADRMLDMGFEPQIRKIFDQVRQDCQILMWSATWPKEVRRLAKDFLGEHI
MLNVGSTNISASHNIKQIVDICEEDEKASKLHLFLNEISKEQQKKIIIFVATKRRVEFIA
KTIYRAGHNVGAIHGDKIQEERDKILNAFRSGRRNILVATDVAARGLDVDGVDFVINYDY
PQNSEDYIHRIGRTGRSNQTGTAYTFFSRKDGSKANDLIRVLSEANQVVRPELQDIAKKF
TETGSNKVGYRNRFGRRGGFRGRNDYRSYPASR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaacctatttgaaacaaagctacactagaagacaaggtgatagtgcaggagga
tactatccccgttttaaggagtcttttaatagacggtttgaatattatgacaattccggc
gtaaactctttcaagccaaaacagataacgggtagctcagaatcatatcaaaaacatgtg
tattctccgcattctgatatcgtgaagagatctaaagaggatatagagtgttaccgtgct
tccaatgaaattttagttgaaggagatgatgtgcctcgcccgattacgtcttttaaggaa
gctgggtttcctgattatttacagtctcagttggcatcacaagggtttgatagtccaact
ccaattcaagctcagggatggcctatcgctttatctggtagaaatatggtgggtgtggcg
tcaacaggatcaggaaagacgttggcctttgtactaccgtctattgttcatattaaacat
attaatgcgaaagaggcgagggggaatggacccatagctttggttttggccccaactaga
gaattagctcagcagatcaaggttgtggctgacaaatatggagaaccatctcgcattaga
agtgcatgtgtctatggaggttctcctaaagggcctcagttacgcgatttagaacgagct
gaactctgcatagctacacctggaagaatgaatgacttcttagaagcaagagaaacaaat
ctcaggcagtgtacatacctcgtcctggacgaagcagatagaatgcttgatatgggtttt
gaacctcaaattagaaaaatttttgatcaagtgagacaggactgtcaaattctcatgtgg
tctgccacttggccgaaggaagttagacgtctagccaaagattttctcggcgaacatatt
atgttgaacgtcgggtcaacgaatatctcggccagccataatattaagcagattgtcgat
atatgcgaggaagatgagaaagccagcaagctgcatttatttcttaatgaaatctcaaaa
gaacagcaaaaaaaaataataattttcgtggcaactaagagaagggtagaatttattgcc
aaaacaatttacagagctgggcataatgttggtgcaatccatggtgacaaaattcaagag
gaacgagataagattctcaatgcattcagaagtggtaggagaaatatattggtggcaaca
gatgttgcagctcgcggtctagacgtggatggcgtagacttcgtgattaactacgattat
ccccaaaacagtgaagattatatacacaggataggaagaacgggaagatccaaccaaact
ggtaccgcttacacattcttctcacgaaaggatggaagcaaagcaaatgatttaatcaga
gtcctctctgaagcgaatcaggtggtaaggcctgaattgcaggatattgctaagaagttc
accgaaacaggcagcaataaagttggttatcgtaatagatttggaagaagaggtggattt
cgtgggcgtaatgactaccgaagttatcctgcttccagatga
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