Artemia franciscana: 136032664
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Entry
136032664 CDS
T10524
Name
(RefSeq) CCR4-NOT transcription complex subunit 4-like isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
afra Artemia franciscana
Pathway
afra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136032664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afra03000
]
136032664
03019 Messenger RNA biogenesis [BR:
afra03019
]
136032664
04121 Ubiquitin system [BR:
afra04121
]
136032664
Enzymes [BR:
afra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136032664
Transcription factors [BR:
afra03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
136032664
Messenger RNA biogenesis [BR:
afra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
136032664
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
136032664
Ubiquitin system [BR:
afra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136032664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-RING_2
zf-UDP
zf-C3HC4_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
136032664
NCBI-ProteinID:
XP_065569023
LinkDB
All DBs
Position
11:1418562..1474451
Genome browser
AA seq
816 aa
AA seq
DB search
MPLQRIESSEEAIECPLCLEPFEMDDLSFYPCTCGYQICRFCWHRIRTDENGLCPACRKP
YAENPADFKPLTSQELAKIKAEKKQKDQAKKQKAYENRKHLQNVRVVQNNLVFVVGLPPK
MADPDILKRAEYFGRFGRIHKVVLNHSNHYAGQQVSGSKSPSCSAYVTYIRSDDALRAIQ
AVNNFCVDGRTLKASLGTTKYCSHFMKNQSCPKADCMYLHEIGEDSASFTKEDMQLGKHQ
EYERKLHEVLIQTSQSTGLINPKDTRRGSTSPQLLSSSAPQLSVSPNAKSGTWPSLDTVH
HNNNKGEKNPSGKLQQPKRETKSNKNREKLEPKSGFQENRFRSTSRSPIESNSVQDAQSN
SSSVTSSTISLAVDCETIAPEEVATSNSDIETMETAREVPSPKYSDSPVNSPSRMPTSEA
VDIPFSTDRHESQGQRQQSKSFFSSATFHNSKAVTTVPPGWSSNGSEDSGISDSLSVASN
ADWNLVARESNTPDPLSGPELKPDDDLGFDPFHETQKALAELVEKENIVQKSKQSSYSNM
PPQSILGATQQLRSRLPPPGFNPPGFITHPLGLTLGNVPLGKNQNSEMMGSKLFPFPSSN
AQQSPLFGIGSTMGQPLPQRQVEPPSLLGLNVLGLSSGYPQPPNTRPQHSHPSLYNRSQS
HDKDPYTVKDWQDGLKNLFPNINITAGPGQQTHAPRYQNQLTLGGHSTLVDSSKTWRSSI
SDWSALDPAIVSAGQLSEGSDSPPHWLRSLEQLTESSANGQFGLHLGSSQYGQPRHDGGS
WPQHVSFGNQIPTAPPPGFSHLRLQQIETQKLIDNL
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgccactacaaagaattgaaagttcagaagaagcaatagagtgccctctttgtcttgag
ccttttgaaatggatgatctgagcttctacccttgtacatgtggatatcagatctgcaga
ttttgttggcatagaataagaactgatgaaaatggattgtgtccagcttgtcggaagcct
tatgcagaaaatccagcagattttaaacccttgacatctcaagagcttgctaaaatcaaa
gcagaaaagaagcaaaaagatcaagcaaagaaacagaaggcatatgaaaatcgtaaacat
ctacagaatgtcagagtagtacaaaataaccttgtttttgttgttggattaccaccaaag
atggcagacccagatattttgaaaagagctgaatacttcggaaggtttggaagaattcat
aaagttgtattaaaccattcaaatcattatgcaggacaacaggttagtggatcaaaaagt
cccagctgcagtgcctacgtaacatatattagatcggacgacgctttaagggctatacag
gcagtgaataatttttgcgttgacgggcggacgttgaaggcatccctaggcactactaaa
tattgttcccattttatgaaaaaccaatcttgtccaaaggctgattgtatgtacttacat
gaaattggtgaggactcagcaagttttacgaaagaagatatgcagttgggcaaacatcaa
gaatacgaacgaaaactgcacgaagttttaattcaaaccagtcagtcgactgggcttata
aatccaaaagacacacggcggggttcaacatctccacagcttttgtcttcatctgctcct
cagctaagtgtctcccccaatgctaagtcagggacatggcccagtttggacacagtacat
cataataataacaaaggggaaaagaatccaagtgggaagttgcaacaacccaaacgggaa
acgaaaagcaataagaatcgtgagaagcttgagccaaagtctggattccaagaaaatcgt
tttaggtccacttcccggtctcccattgagtctaattctgttcaagatgctcaatcgaac
tcgagttctgtgacatcttccactatatctttagctgttgactgtgaaaccatagctcct
gaagaagtggcaacgtcgaattctgacatagagacaatggaaacagcgcgtgaagtacca
tccccaaagtatagcgatagtcctgtaaattcaccaagtcgaatgcccacatcggaagca
gttgatataccattttctacagaccgacatgagagtcagggtcaaagacaacaatcgaaa
agtttcttttcatctgcaacgtttcacaactcgaaggcagttacaacggtccctccaggc
tggtcatccaatggctctgaagatagtggtatttctgattctctatcagtagccagtaat
gcagattggaatttagtagcaagggagtcaaatacaccagatcccttgtccggtccagaa
ttgaagccagatgacgatttaggatttgatcctttccatgagacacagaaagccctggct
gagctggtagaaaaggaaaatatagtgcagaagagtaaacagtcaagctattctaatatg
ccaccgcaaagtattcttggtgccactcaacagctgaggagtcgccttccgcctcctggt
ttcaatccaccaggttttattacccaccccttggggctgacgcttggaaacgttcccctt
ggaaaaaatcagaattcagaaatgatgggtagcaaattgttcccgtttccgtcatccaat
gctcagcaaagtcccctctttggaattggctcaactatgggtcagccacttccacagcga
caagtggagccaccctctctattaggattgaatgtactaggtctttccagtggttatcct
cagccgcctaatacaagaccccagcactcgcatccatcgttgtataacagatcacaaagc
catgataaggatccatatactgttaaagattggcaggatggtttgaagaacctattccca
aatataaatattacagctgggcctggtcaacagacacacgctcctagataccagaatcag
ttgacgcttgggggacattcaactttagtggattcgtctaagacttggcgtagcagtatt
tcagactggagtgctttagatccagccatagtatctgctggacagcttagtgaaggctca
gattcgccaccgcattggctaagatccttagagcaattgactgaatcatctgccaacggt
caattcggtttacatttaggttcttcacagtacggacaaccgcggcatgatggaggtagt
tggccacagcacgtcagcttcgggaatcagataccaaccgcaccgcctcctggcttttct
catttgcggctccagcagatagaaactcagaaactaattgacaatctataa
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