KEGG   Artemia franciscana: 136033113
Entry
136033113         CDS       T10524                                 
Name
(RefSeq) histone deacetylase HDAC1-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
afra  Artemia franciscana
Pathway
afra03082  ATP-dependent chromatin remodeling
afra03083  Polycomb repressive complex
afra04330  Notch signaling pathway
afra04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:afra00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    136033113
   03083 Polycomb repressive complex
    136033113
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    136033113
   04350 TGF-beta signaling pathway
    136033113
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:afra03036]
    136033113
Enzymes [BR:afra01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     136033113
Chromosome and associated proteins [BR:afra03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     136033113
   HDAC complexes
    Sin3A-HDAC complex
     136033113
    BRAF-HDAC complex
     136033113
    REST complex
     136033113
    SHIP complex
     136033113
    MiDAC complex
     136033113
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     136033113
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    136033113
  Chromatin remodeling factors
   NuRD complex
    136033113
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 136033113
NCBI-ProteinID: XP_065569814
LinkDB
Position
11:complement(32901812..32987232)
AA seq 469 aa
MSSSSSKKRVCYYYDSDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATA
DEITKFHSDDYIRFLRSIRPDNMGEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAGA
VKLNKQSTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGD
GVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDDSYEQIF
VPIMSKVMETYQPSAVVLQCGADSLSGDRLGCFNLTLKGHGKCVEFFKKLNIPLLLLGGG
GYTIRNVARCWTYETSVALSCEIANELPYNDYFEYFGPDFKLHISPSNMGNQNTTEYMDK
IKTRLFENLRMLPCAPGVQMQAIPEDAINEQSDDEEKQNSDERISIRASDKRVQPDNEFS
DSEDEGEGGRKDQRTHKKKKAKGDVEEVVMTEHKVDSESKIETMEEMSK
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgagtagcagcagcagcaaaaagagagtttgctactattatgacagtgatgttggcaat
tattattatggccagggacaccccatgaagcctcatcgtataaggatgactcataattta
ttgctcaattatggactgtatagaaaaatggaaatttaccgtcctcataaagcaactgcc
gatgaaataacaaagtttcatagtgacgattatattcgtttccttcgcagtattcgacct
gataatatgggagaatataataaacaaatgcaaagatttaatgttggtgaagactgtccc
gttttcgatggactatatgaattttgtcaattatctgcgggtggatctgtagcaggagca
gttaagcttaataaacaatcaacagatatagccatcaattgggctggtggacttcaccat
gctaaaaaatcagaagcctctggtttttgctatgtgaacgacatagttttagcaatttta
gagcttttaaagtatcatcagagagttttatatgttgatattgatattcatcatggagac
ggcgttgaagaagctttttatacgactgatagagtgatgaccgtctcttttcataagtat
ggcgaatatttccctggaactggagatttaagggatattggtgctggaaaaggaaaatat
tacgcagttaattttccattgagagatggtattgatgatgacagctatgaacaaatattt
gttcctatcatgagcaaagtaatggaaacctatcaaccaagcgccgtcgttcttcagtgc
ggtgctgacagcttaagtggtgatcgtcttggatgcttcaatctaaccctaaaagggcat
ggaaaatgcgttgagtttttcaagaaacttaatataccactgttgcttcttggaggcggt
ggatacactattcgaaacgttgccagatgctggacttatgaaacctcagtggctctcagc
tgtgagatagcaaatgaactgccatataatgactactttgaatattttggtccagatttt
aagctacatattagtccatccaatatgggcaatcaaaatactaccgaatacatggataaa
ataaagacaaggctttttgagaatttgagaatgttgccctgtgcacctggagttcaaatg
caagcaatacctgaggatgcgatcaacgaacaatcagatgacgaagaaaaacaaaattcg
gatgaaaggatttcaatcagagcctctgataagcgagtgcaaccagacaatgaattctct
gattctgaagacgaaggtgaaggcggaagaaaagatcaaagaacacacaaaaagaagaaa
gccaaaggagatgtagaagaagttgttatgacggaacataaagttgactcagaatcaaag
atagaaacaatggaagagatgtccaaatga

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