Artemia franciscana: 136033707
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Entry
136033707 CDS
T10524
Name
(RefSeq) exosome complex exonuclease RRP42-like
KO
K12589
exosome complex component RRP42
Organism
afra Artemia franciscana
Pathway
afra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136033707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afra03019
]
136033707
Messenger RNA biogenesis [BR:
afra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
136033707
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
136033707
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
CcdA
Motif
Other DBs
NCBI-GeneID:
136033707
NCBI-ProteinID:
XP_065570649
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All DBs
Position
12:complement(13113912..13171460)
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AA seq
289 aa
AA seq
DB search
MSEVAICIPEKTFILHGVDDDLRNDGRSYLDYRPLAIETGILPQPNGSCRVRLATSDILV
ATKLELEQPDKNSSKEGKIEFFVDCSANATPEFEGRGGNEFGNLIAQHLSRAYGHPSVLD
LETLCVVPEKYSWKIFVDILILQCGGNLFDAVSLAVKGALFNTEIPKISVTSVDGGEPEL
EVSDDPKNVWRLPSELFPCLVTLCMIGDNCIVDPTAEEEACSKVAFVFGVTENKRIVATR
KMKGGSISPESLAKALEVAGNLGEVLNKALMDKLHREERKGGKRLGFLS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagtggcaatttgtataccggaaaaaacatttatattacatggagtcgatgat
gatcttagaaatgatggtagatcttacttagactataggccacttgcaatagagactgga
atccttcctcaacccaatggatcatgtagagtaaggcttgcaacttcagatatccttgta
gccactaaacttgagcttgaacagcctgacaaaaatagctcaaaggaagggaaaattgaa
ttttttgtcgactgctcagccaatgccacacctgagtttgaaggcaggggaggaaatgag
tttggcaatcttatagcgcagcatttatcccgtgcttatggccacccttccgttttagat
ctggaaactctttgcgtagttcctgaaaaatatagctggaaaattttcgttgatatactg
attctccagtgtggagggaatctctttgacgccgtgtctcttgctgtaaaaggagccttg
tttaatactgaaatacccaagatttctgttacatcggtagatggcggtgaaccagagctt
gaagtttcagatgaccctaaaaatgtttggagacttccatcagaactatttccttgcctt
gtaacgctgtgcatgattggtgataattgtattgttgatcccactgcagaggaagaagca
tgttcaaaagtggcatttgtttttggagtgactgaaaacaaaagaattgtagcaaccaga
aagatgaaaggcggatccatttcaccagaaagtttagccaaggctctggaggtagctgga
aacctgggagaagttttgaacaaagctcttatggataagctacatcgggaagaacgaaag
gggggaaagagacttggttttttgtcataa
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