Artemia franciscana: 136033934
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Entry
136033934 CDS
T10524
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
afra Artemia franciscana
Pathway
afra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136033934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afra03041
]
136033934
Spliceosome [BR:
afra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
136033934
Complex C
U5 SnRNP specific factors
136033934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
136033934
NCBI-ProteinID:
XP_065571023
LinkDB
All DBs
Position
12:complement(27008959..27105353)
Genome browser
AA seq
2367 aa
AA seq
DB search
MSLPPFFIPNQQWAAANMVAQAQQQAQLAHAQAQAVQQMQAYRQAQATQNKQRQDAYDEE
KLQEKARKWQQLQSKRYAEKRKFGFVDAQKEDMPPEHVRKIIRDHGDMSSRKYRHDKRVY
LGALKYMPHAVLKLLENMPMPWEQIRDVKVLYHITGAITFVNEIPWVIEPVYMAQWGTMW
IMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNILDVEPLEAIQIDLDPEEDKSIAEWFY
ENKPLVGTPYVNGSTYKRWQLTIPMMASLYRLANQLLTDLVDENYFYLFDVKSFFTAKAL
NMAIPGGPKFEPLFKDQASAGDEDWNEFNDINKIIIRQPIRTEYRIAFPYLYNNLPKEVH
LSWYHTPNVVFIKTEDPDLPAFYFDPLINPISTRSSGKIPENLPGDDEEFILPDFVAPLM
QEWPLYTDNTANGIGLLWAARPFDMRSGHTRRAQDIPLVKSWYREHCPPGQPVKVRVSYQ
KLLKYFVLNSLKHRPPKPQKKRYLFRSFKATKFFQQTTLDWVEVGLQVCRQGYNMLNLLI
HRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIVDSHVQYRLNN
VDAFQLADGLQYVFAHVGQLTGMYRYKYKLMKQIRMCKDLKHLIYYRFNTGPVGKGPGCG
IWAPGWRIWLFFLRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRAS
VMHDIVDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPIPIENMILRYVKMRAD
WWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYISPEEAVA
IYTTTVHWLESRRFAPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIE
QAYDNPHEALSRIKRHLLTQRSFKEVGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWY
EADKRRLFPPWIKPADSEPPPLLVYKWCQGINNLQDVWDTADGECNVMLESRFEKLYEKI
DITLLNRLLRLIVDHNIADYMSAKSNVVINYKDMNHTNSYGIIRGLQFASFIVQYYGLVL
DLLGLGLQRASEMAGPPQMPNDFLTFQDVATETTHPIRLYSRYVDRIHIFFRFTAEEARD
LIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTI
QWEGSFVSVYSKDNPNLLFNMCGFECRILPKIRMTHEEFTHRDGVWNLQNEVTKERTAQC
FLRVDDDSLTKFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFRESVVNTQELLDLL
VKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTEV
GITHFRSGMSHDEDQLIPNLYRYIQPWEAEFIDSQRVWAEYALKRQEANAQNRRLTLEDL
EDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTEFKQYQVLKQNPFWWTHQRHDGKLWNLN
NYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQ
IPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHES
VVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAYKWNVSRPSLLADS
KDMQDNTTTQKYWIDVQLRWGDYDSHDVERYARAKFLDYTTDNMSIYPSPTGLLVAIDLA
YNLHSAYGHWFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNY
GELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWA
GQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSE
LQLPFQACLKVEKLGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNND
RTKVILKPDKTTITEPHHIWPTLTDDEWIKVEVALKDLILADYGKKNNVNVASLTQSEIR
DIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTSNYETTTFA
SKTEWRVRAISATNLHLRTNHIYVPSEDIRETGFTYILPKNVLKKFVTISDLRTQISGYL
YGISPPDNPQVKEIRCIVMPPQFGGPQSVNLPTMLPQHEYLKELEPLGWIHTQPNELPQL
APQDITSHARIMAEHPEWDGEKTIIMTCSFTPGSCSLQAYKLTPSGYDWGRQNTDKGNNP
KGYLPSHYEKVQMLLSDQFLGFFMTPSQGSWNYNFMGVRHDPSMKYELQLANPKEFYHEV
HRPSHFLNFSALEEGEAIGADREDVFA
NT seq
7104 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcctcctttctttatcccaaaccagcaatgggctgcagccaatatggttgct
caagcccagcagcaagctcaacttgcccatgctcaggcacaagctgtccagcaaatgcag
gcttaccgtcaagcacaagcaactcagaataagcaaagacaagatgcatatgatgaagaa
aagctgcaagagaaagcaagaaaatggcagcagttgcaatcaaagcggtatgcagagaag
cggaaatttggattcgttgatgctcagaaagaagacatgcctcctgaacatgttcgaaaa
attattagagatcatggtgatatgtctagtcgaaaatatagacacgataagcgggtttac
ttaggggctttgaaatatatgccacatgctgtgttgaagttacttgagaatatgccaatg
ccttgggagcaaatccgtgatgtaaaggttctataccatattaccggtgctattacattt
gtcaatgaaatcccatgggttattgaaccagtatatatggcacaatggggtacaatgtgg
atcatgatgcgtcgtgaaaagcgagatcgacgacacttcaagcggatgaggttcccccct
tttgatgacgaagaaccccccttggactatgctgataatatattagatgttgaacccctg
gaggcaattcaaattgatcttgacccagaagaggacaagtccattgcggaatggttctat
gaaaataaaccacttgttggaacaccttatgtaaatggttcaacatacaaacgatggcag
ttaaccatcccgatgatggccagcttatacagattagccaatcagcttctaacagatttg
gtagatgaaaactatttttaccttttcgacgtcaaatccttctttacagctaaagcgttg
aatatggctatcccaggaggacctaaatttgaaccattatttaaggaccaggcctctgct
ggtgacgaagattggaatgaatttaacgatattaacaagatcattattcgtcaaccaatt
agaactgaatatcgaatagcctttccttacctttataacaatctgcctaaagaggtacat
ctgtcatggtatcatacaccgaacgtcgttttcatcaagacagaagatcccgatcttcct
gctttttactttgaccccctgattaacccaatctcgacacgaagtagtggaaaaatacca
gagaatttaccaggcgacgatgaggaatttatattgcctgacttcgtggcccctttgatg
caggaatggccactgtataccgacaacacagccaacggtatcggtctcctttgggccgcc
cggccatttgacatgcgctctggtcacactcgacgtgcccaagacatcccacttgtaaaa
agctggtatagagagcattgtccaccgggtcagccggtcaaagtcagggtttcctaccag
aagctgctgaagtattttgttttgaatagcttgaagcatagaccgccaaagccacaaaag
aagagatatttattcaggtccttcaaagctacgaagttcttccagcaaactacattggat
tgggtggaagttggtttacaagtctgtcgacaggggtataatatgctcaacctgttgatc
catcgtaagaatctcaactatcttcatttggattacaattttaatttgaagcccgtgaaa
actctgacaacaaaagaaaggaaaaagtctcgtttcgggaacgcctttcatctttgtcgt
gaaatacttcgattgaccaaattgatcgtggactctcatgtacagtaccgcttgaacaat
gttgatgcgtttcaactggctgatggactccagtatgtttttgcccacgttggacagttg
actggaatgtacagatataaatacaaattgatgaagcaaattcgaatgtgcaaggatttg
aagcatttgatctactataggtttaacacgggtccagtggggaaagggccagggtgtggt
atttgggccccaggttggcgcatctggcttttcttccttcgtggtatcacgcctctcctc
gagagatggttgggtaacctcctatcccgtcaatttgaaggtcgtcattcaaaaggtgtt
gccaaaaccgttaccaagcaacgtgttgagtcgcattttgatttggagctgagagcgtct
gtgatgcatgacattgtggacatgatgcctgaaggtataaagcaaaacaaggcaaggacg
atattacaacatttgagtgaggcttggaggtgctggaaggccaatattccttggaaggtt
cctgggttgcctatacctattgagaacatgatattaagatatgtaaagatgcgtgctgat
tggtggacaaatacagctcattataaccgcgaacgtattcgtcgaggtgccactgttgac
aaaactgtgtgcaagaagaatcttgggcgtttaacgcgtctctacttgaaggctgaacag
gagaggcaacacaactatctgaaagacggtccctatatttcaccagaagaggcagttgcc
atttatacaaccacagttcattggctggaatctcgacgttttgctccaatcccattcccc
cctctttcatacaaacacgatactaaactactcattttagccttggaaagattgaaagaa
gcttatagtgtcaaatcacgactgaatcaaagtcaaagagaagagcttgggctaatagaa
caagcgtacgacaatccccatgaggcattgtccagaatcaaaagacatctgctgacacag
agatccttcaaagaagttggtattgaattcatggatctgtacagtcacttagtccctgtt
tatgacgtggagcctcttgagaaaatcactgatgcatatctggatcagtatctatggtat
gaggctgataagagaaggctgttccctccttggattaagccagcagactcggagcctcct
ccactgttggtgtataagtggtgtcagggaattaataaccttcaagatgtgtgggacact
gctgatggagagtgtaatgtcatgttggagtctcgatttgagaagctttatgagaagata
gatattacgttacttaacaggctcctgcgtctcattgtggatcataatattgctgattac
atgtctgcaaaaagtaacgtcgttattaactataaggatatgaatcatacaaacagctac
ggtattattcgaggattgcaatttgcttcatttatcgtccagtattatggtttggtttta
gatcttcttggtcttggtctacaaagagcatcagagatggcggggccaccgcagatgcca
aatgattttctcacattccaagatgtcgccacagaaacaactcatcccattcggttatat
tcgagatatgtggatagaattcatattttttttaggttcacagctgaagaggcccgtgac
ttgattcagcgctatctaacagaacatccagatccgaataatgaaaacattgttggctat
aataacaaaaaatgctggcctcgcgatgcacgcatgcgacttatgaaacatgatgttaat
cttggtcgagccgttttttgggacataaagaatcggctcccacgctcagtgactacgatc
cagtgggaaggaagctttgtatctgtttattcaaaggacaatccaaacctgctgttcaac
atgtgtggtttcgagtgtagaatcctccctaagattcgtatgacacacgaagaattcacc
catagagatggtgtatggaatcttcaaaacgaggtcaccaaagaaagaactgctcagtgt
ttccttcgtgttgatgatgactcattgaccaaatttcataaccgtgttcgtcaaattctc
atggcctctggttcgactactttcaccaaaattgtcaacaaatggaacacggcactgatt
ggtcttatgacttacttcagggaatcagttgtaaacacacaagaactgctggacttgctt
gtgaagtgtgagaacaaaatacaaactcgtatcaaaattggactgaactccaaaatgccg
agtcgatttcctccagtcgttttctatacgccaaaagagctgggaggtctgggtatgctg
tcgatgggacatgtgttaatacctcagtccgatctacggtggtcaaagcaaactgaagtt
ggcataacccacttccgttcgggtatgtctcacgacgaagatcagctcattcccaacttg
taccgatacattcagccttgggaagccgaatttattgactcgcaaagggtatgggcagaa
tatgctctcaaaagacaagaggctaatgctcaaaatcgaagattaacccttgaagatttg
gaagactcttgggacagaggtatccctaggattaacacactattccagaaggatagacat
accctggcttatgataaaggatggcgtgttaggactgaatttaaacagtatcaggttctg
aagcaaaatcccttctggtggactcaccaacgtcacgacggcaaactgtggaacttgaat
aactatcgaactgacatgattcaagcccttggcggtgttgagggtatccttgaacataca
ttattcaaagggacctatttccccacctgggaaggtctcttctgggaaaaggcctctggt
tttgaggaatcgatgaagtataaaaagttgacaaatgcccagagatcgggtttgaatcaa
attccaaatcggcgatttacgctctggtggtctcccactattaatcgcgcaaatgtctac
gtgggatttcaagttcagttggatttgacgggtatttttatgcatggcaaaattccaacc
ttgaagatatcgttgattcaaattttccgtgctcacttgtggcagaagatccatgagtcg
gttgttatggatctttgtcaggtatttgatcaagagttggatgctttggaaattgaaacc
gttcaaaaagaaacaattcacccccgaaagagttacaagatgaattcgtcctgtgccgat
attcttttgtttgctgcttataaatggaacgtttcccgtccttcacttctcgctgatagc
aaagatatgcaagacaatacaactacccaaaaatattggattgatgtacaattacgttgg
ggtgactatgacagtcacgacgtggagcggtatgccagggccaagtttctggattatact
actgataatatgtccatttatccctcaccaactgggcttttagttgctattgatttggct
tataaccttcacagtgcttatggtcattggttcccgggctcgaagccacttatccagcaa
gccatggctaagattatgaaggccaaccctgctctttatgtgttgcgtgagagaatcagg
aaaggtcttcagctatacagctctgagccgactgaaccttatttgtcatctcaaaattac
ggagaattattttcaaaccaaattatctggtttgtagatgatactaatgtataccgtgta
acgattcacaagacctttgaaggcaatttgactacaaaaccgattaatggtgcgattttc
atatttaatcctcgaactggtcaacttttcttgaaaatcattcacacttcagtttgggct
ggacagaaacgtttaggtcagctggccaagtggaagacagcagaagaagttgctgctctt
attcgatctctacctgttgaagaacaaccgaaacagattattgttacaagaaagggtatg
cttgacccattggaggtgcatttacttgatttcccaaacattgttatcaaaggttcagag
cttcaacttcccttccaagcttgtctgaaggttgaaaaacttggtgacctcattttgaaa
gcaactgaaccacagatggtgttgtttaacctttatgatgattggttgaaaacgatttct
tcatacacagccttctctcgtttgattttgattctgagagcgttgcatgtcaataatgac
cgtacgaaggtcattctcaaacctgataagacaacaattacagaacctcatcatatatgg
ccaactttgactgatgatgaatggattaaggtagaggtagcactgaaagatttgatcttg
gctgattatggtaagaaaaacaacgttaatgttgcatcgttgacccagtcagaaattagg
gatattattcttggtatggagatcagtgcaccatctgctcaaaggcagcaaattgctgag
attgagaagcagacaaaagaacagagtcaacttaccgcaaccactactcgtaccgtcaat
aaacatggtgatgaaatcataacgtctactacatccaattatgaaacaactacatttgca
tcgaaaactgagtggagagttcgtgctatatctgctacaaatcttcatctgcgtactaat
cacatttacgttccatcagaagatatccgagagactggatttacatacatcctccctaag
aatgtcctgaagaaatttgtgacgatttctgatcttcgtacccagatttctggatatctt
tacggcatcagtccaccagacaatccgcaagttaaagaaattcgctgtattgttatgcca
cctcagtttggtggtcctcagtctgtaaacttaccaacaatgctgccacagcatgaatac
ctcaaagagctagaacctcttggctggattcatactcagcctaatgaactccctcaactg
gcacctcaggatatcaccagccatgctcgaatcatggctgaacatccagagtgggatggt
gaaaaaaccatcataatgacctgcagtttcactcccggctcttgctcccttcaagcgtat
aaactgactccaagtggttatgattggggaagacagaacacagataagggtaataatcct
aaaggctatctaccgtcgcattatgaaaaagttcagatgcttttgtctgaccagttcctt
ggcttctttatgactccatcacagggctcctggaactacaactttatgggcgttcgtcac
gatccaagcatgaagtatgagctgcagttggcaaatcccaaagaattctaccatgaagtc
caccggccttcacattttttaaatttctcagctttggaagaaggggaagcaattggggct
gacagagaagacgttttcgcgtag
DBGET
integrated database retrieval system
