Artemia franciscana: 136034087
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Entry
136034087 CDS
T10524
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
afra Artemia franciscana
Pathway
afra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
136034087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afra03400
]
136034087
DNA repair and recombination proteins [BR:
afra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
136034087
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
136034087
NCBI-ProteinID:
XP_065571283
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Position
12:complement(38549555..38632632)
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AA seq
884 aa
AA seq
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MFCLFLDSSPPQESAFVTFLKKLPEKQSTTVRLFDRGEFFSLYGQDAIFASKELFKTSGA
VRYIGEEKVECLSIGKNNVRNFLRELLILKQYCVELYQSSGSRSSGEWTVIARASPGNLS
QFENLLFGEVESSQESPSIAALQVSHLENQKLIGFGLCDVNSRKFLVSEFADNDSFTNVE
ALLAQLGPREVLIPGGSDSSQDTTRLKQVIERSGAMVTEKKKADFSSKDIVQDLNRLLKL
KKKQKGTAGALPEVSLNSACSCLASAIKYADILMDESNFNSFKISTFDFSRYMRLDSNAI
KALNVLPTPGQPTLHSLVGLLDKCKTPQGSRLLTQWVRQPLTDLLQLEARLDLVQAFIDC
QRVSSILSEDMLKRIPDFQKLAVKMLKKKGTLQDCYRIYLALEKLPSIISLFEEDSELLK
RSLGTRLSDGVTETEKLKELVESTVDLNRASEGDFIIRPDFDEELEELHNSISEIEDGMQ
KALQKTARDLALEAGKTIKLEDAPQHGYCYRVTMKEEKGLRNNRNYTTLDVTKGGVRFRN
SDLTDLNSQFKEKKKDYEENQKRIVDEIVTITAGYFEPLMLLNDVIAEIDTLLSLATVAL
NAAIPWVRPSLLPIGTGILKIAEARHPCLEATGVCDVIPNDASFSQDDGMFHIITGPNMG
GKSTYLRTVGLCVLLAQIGSFVPCESAEISLHDAIYTRVGAGDIMLRGVSTFLAEMIEVS
VILQAATSDSLILVDELGRGTSTYDGFGLASAISKKLATGIKSHCLFATHYHELTRLAQS
IKAIKNYHVTALSDGDSLIMLYKVKPGVCDQSFGIHVAEIAKFPERILEAAKEKVTEYET
LSGSSKGDEINKIYEYLNGRVKEEDGDKALSVAARELKRLLTNL
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgttttgtctttttttagattctagtcctcctcaagagagtgcatttgttactttcttg
aagaagctacctgagaaacaatcaacgactgttcgactattcgatcgtggggagtttttc
agtctatatggacaagacgccatcttcgcttctaaagagctgttcaaaacgtctggtgct
gtaagatacattggggaagaaaaagttgaatgtctatccattggcaaaaataatgttaga
aactttttgcgagagcttctaattttaaagcagtattgtgttgagctgtatcagagttct
gggagtagatcttctggagaatggactgttattgcaagagcgtcccctggtaacctctcg
caattcgaaaatctgctatttggtgaagttgaatcatcacaggagtcacctagtattgcg
gcactacaggtatctcacttggagaatcagaaactgatcggatttgggctctgtgatgtc
aactcacggaagtttttggtttctgaatttgccgacaatgactcttttacaaatgttgaa
gcattgttagcgcagctcggaccacgcgaggtgctcattcctggtggctcagattctagc
caagacacaactaggctaaaacaggtaattgaacgcagcggggcaatggtgacggagaaa
aagaaagctgatttttcatctaaggatatcgttcaagacttgaatcgacttttaaagctg
aaaaaaaagcaaaaaggtactgctggagccctacctgaagtgtcactaaatagtgcttgc
agttgccttgcctcggcaattaaatacgcagacattctcatggatgaatcgaacttcaat
tcctttaaaatatccacttttgacttttcacgatatatgcgacttgattcgaatgcaata
aaggctttaaacgtattgccaacacctggtcaacctactcttcacagtctagttgggcta
cttgataaatgcaaaacacctcaaggatccagacttttaacacagtgggtgcggcagcca
ttaactgacctcctgcaactagaggcacgtttagatttagttcaagcatttattgattgt
caaagggtttcttccattctgtcagaagatatgctaaagaggattcctgattttcagaag
ttagctgtgaagatgctgaaaaagaaaggaacattacaggattgctacaggatttacttg
gctctggagaagctgccatctataatatcattatttgaagaagacagcgaattgttgaaa
agaagtcttggaactcgattatcagatggtgtaactgaaactgagaagctcaaggaacta
gtggaaagcacagttgacttgaatagagcatccgagggtgactttattatcagacctgac
tttgatgaagaattggaagagctccacaattcaatatcagaaattgaggatggtatgcag
aaggcccttcaaaagacagcacgtgaccttgcacttgaggctggaaaaacaatcaagcta
gaagacgcacctcagcatggttattgttaccgtgtgactatgaaagaggagaaaggactt
cgcaataatcgtaattatacaactttggatgttactaagggtggagttcgatttcggaat
tccgatttaacggacctgaattctcagtttaaagaaaagaagaaagattatgaagaaaat
caaaagagaattgtcgacgaaattgttacaatcacagctggctattttgaaccacttatg
ctactaaatgacgttattgctgaaattgacacccttctgtcattggcaaccgtggctctc
aacgcagcgattccatgggttcgtccctcattgctgccaattggtactggtattttgaaa
attgctgaagcccggcatccttgcctggaagcaacaggagtttgtgatgttatcccaaac
gacgcttcgttttctcaagacgatggaatgttccacataattactggtcccaacatggga
ggcaaaagcacgtatttacgaactgttggtctttgcgtactattggctcaaattggatca
tttgttccgtgtgaatctgctgaaatttcactgcatgacgccatctacacaagggtggga
gctggtgatataatgcttagaggagtctccacttttttggctgaaatgatcgaagtttct
gttatcttacaggctgccacctcagattctctaatcctcgtcgatgagctgggacgaggg
acctctacatacgacggttttggtttggcatctgctatatccaagaaattagcgactgga
ataaaatctcactgtctatttgcgactcattaccatgaactcacacgtctggctcagagc
attaaagcaattaagaattaccatgtcaccgctttgagtgatggcgattcccttataatg
ttgtataaggtcaaaccaggtgtttgtgaccagagctttggtattcatgttgcagaaata
gcaaagttccctgaaaggatattggaggctgccaaggaaaaggttactgagtacgagact
ctctctggttcttctaaaggagatgagataaataaaatatatgaatatttgaatggtcgt
gtgaaggaagaagatggagataaagcgctttcagttgccgctagagagctgaaacggctt
cttacaaatttataa
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