Artemia franciscana: 136036454
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Entry
136036454 CDS
T10524
Name
(RefSeq) pre-mRNA-processing factor 6-like
KO
K12855
pre-mRNA-processing factor 6
Organism
afra Artemia franciscana
Pathway
afra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136036454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afra03041
]
136036454
Spliceosome [BR:
afra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
136036454
Complex C
U5 SnRNP specific factors
136036454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
Suf
HAT_Syf1_CNRKL1_C
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_17
FAT
TPR_16
ARM_TT21_N
TPR_CcmH_CycH
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
136036454
NCBI-ProteinID:
XP_065574765
LinkDB
All DBs
Position
15:complement(39514061..39605183)
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AA seq
932 aa
AA seq
DB search
MAVNIPSISLNQRKKSFIGVQSPLGYVAGVGRGATGFTTRSDIGPARETNDVPDDRHAPP
VGKRKKTDEEEEEEDLNDSNYDEFSGYGGSLFNKDPYDKDDEEADAIYEAIDNRQDEKRK
DRREKRSKAELEQYRQERPKIQQQFSDLKRQLQEVSEDEWKTIPDVGDARNRRQRNPMAE
KMTPIPDSVLARSMGGTFSTTLDPKSGLASAIPGNLSAVPGNLTPSGELDLRRIGEARNT
LMDIKLTQVSDSVTGQTVVDPKGYLTDLQSMIPQYGGDINDIKKARLLLKSIRDTNPHHP
SGWIASARLEEVTGKIQAARNLIMQGCEACPKSEDLWLEAARLQPPDVAKGVIATAVRSL
PTSVRIWVRAAELEADVKAKRKVFRKALENIPNSVRLWKEAVELEEIKDARIMLSRAVEC
CPNSVELWLALARLETYENARKVLNKARENIPTDSSIWITAAKLEEANGNEKMVMKIIER
AIQSLKSSGVEINRNLWIEAAMEAERAKSVLTCQAIIRAVIGYDVEEEDRMETWLQDAES
CTNDGAFECARAVYAHALSIFPNKKAIWLRAAYFEKDHGTQESLDALLRKAVQFCPKEEV
LWLMGAKSKWMAGDVPAARSILSLAFQANPNSEEIWLAAVKLESENSEYERARRLLAKAR
SSAPTPRVVMKSAKLEWSLGELKTALSFLEEGIHKYPNFPKLYMMKGQIETVLEQYLVAR
ETYNQGTKKNPHSVPLWILFSRLEERLGSLIKARCVLEKGRLKNPQSPDLWLEAVRIENR
SGNKDMATKLMSKAMQECPTAGVLWAENIFMAPRPQRKTASVDAIKKCEHDPHVLLAVSK
LVWTERKLDRARDWFLKTVKIDPDFGDAWAYFFKFELAHGTETQQDEVKKRCTAAEPHHG
EMWQQVAKRPEYWRKKIGEILEIVAKELPIPT
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgaacattccatcgataagtcttaatcaacgaaagaaatcttttattggtgtt
caatctccacttggatatgttgctggtgttggtagaggtgccactggttttacaacaagg
tcagatattggccctgccagagaaacaaatgacgtcccggatgatcgccatgctccacca
gtaggtaaacgaaaaaagacagacgaagaggaagaagaagaagatttaaacgattcgaat
tatgacgagttttctgggtatggaggttcactcttcaacaaagatccctatgacaaagac
gatgaagaagctgatgccatctatgaagctattgacaataggcaagatgaaaaacgcaaa
gatagacgtgaaaagaggagcaaagccgagcttgagcagtaccgacaagagcgtcctaaa
attcagcagcagtttagcgatttgaaacgtcagctccaagaggtcagtgaagatgagtgg
aaaaccataccggatgtgggcgacgctcgaaatcgtcgacaaagaaatccaatggcagag
aagatgacgcctatacctgactcagttttagcccgaagtatgggtggcactttttcaacg
acccttgacccaaagagtggattggcttctgcaattccaggaaatttgtctgctgtacca
ggtaatttaacaccatctggtgaacttgatttgcgacgaattggagaggctagaaataca
ctgatggacatcaaactaactcaggtgtcagattcagtgacaggtcaaaccgtcgttgat
cctaaaggctacctcacagatcttcaatctatgatacctcaatatggaggtgatatcaac
gatataaagaaagctcgtctgttgttaaagtcaattagagacacgaacccacatcatcct
tcggggtggattgcatcagccagactcgaggaagtcaccggaaaaattcaagcagcccgc
aatctgataatgcagggctgtgaagcttgtcccaaatctgaagatctgtggctggaagcg
gctcgtcttcaacctcctgacgttgctaagggtgttattgcaactgctgtccggtcgctg
ccaacttctgttcgaatttgggttcgtgctgctgaacttgaagctgatgttaaggctaaa
agaaaagtttttagaaaagcattggaaaatattcctaattctgtgcgcctctggaaggaa
gcagttgagttggaagaaatcaaagatgctagaataatgctttcaagagctgttgaatgt
tgccccaacagtgttgaactatggctggctcttgcgaggcttgagacgtatgaaaatgcc
agaaaggtattgaataaagcccgtgagaacattcctactgatagttctatttggatcact
gccgccaaacttgaagaagctaatggtaatgaaaaaatggttatgaagattattgaaaga
gcaattcaatctttgaaatcaagtggtgttgaaatcaatcggaatctgtggatagaagca
gcgatggaagcagaaagagcgaaatctgttctcacttgtcaggctattattcgggctgtc
attgggtatgatgttgaagaagaggatagaatggaaacttggctccaagatgccgaatcg
tgtacgaatgacggtgctttcgaatgtgccagagccgtttatgcacatgccctgtctatc
ttcccgaacaagaaagcgatatggctgagggctgcttactttgaaaaagatcatggaact
caggagtcgctagatgcccttcttcgaaaggctgttcagttctgtccaaaagaagaggtt
ctttggcttatgggcgccaagtctaaatggatggcaggagacgttccggcggcaagaagc
atattgtctcttgcttttcaagcaaacccgaattctgaagaaatctggttggctgctgtg
aagttggaatcagaaaactcagaatatgaaagagcaaggaggctattggctaaagctcga
tcttcagcaccgacaccaagagttgttatgaaatcagccaaattagaatggtctttggga
gaattaaagacagcgttgtctttcttagaagaaggaatccataaatatcccaattttcca
aagctttacatgatgaagggacagattgaaacagttcttgagcaatatttggtggccaga
gaaacatataatcaagggacgaagaaaaacccacattctgtacctctatggattttattc
tcgcgccttgaagaaagacttggaagtttaattaaggccagatgtgtgctagaaaagggt
cggctcaaaaatccacagtcgccagatttgtggcttgaagctgtaagaatcgaaaatcga
tctggaaataaagatatggcgacaaagcttatgtcaaaagctatgcaagaatgccctact
gcgggagtcctttgggctgagaatatatttatggccccccgacctcaaagaaaaacggcc
agtgttgatgctatcaagaaatgtgaacatgatccacacgttcttcttgctgtttccaag
cttgtatggacggagaggaaattggacagggcccgggactggtttttgaaaacggtcaaa
atcgaccccgacttcggtgatgcttgggcatatttctttaagttcgaactagctcacggc
actgagactcaacaagatgaagtaaagaagcgctgtaccgcggcagagccacatcatgga
gaaatgtggcagcaagtagccaaaagacctgaatattggcggaagaaaattggtgaaatt
ctagaaattgttgcaaaagaactgcccattccaacctaa
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