Artemia franciscana: 136037123
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Entry
136037123 CDS
T10524
Name
(RefSeq) collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
afra Artemia franciscana
Pathway
afra04382
Cornified envelope formation
afra04512
ECM-receptor interaction
afra04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
136037123
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
136037123
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
136037123
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afra04147
]
136037123
00536 Glycosaminoglycan binding proteins [BR:
afra00536
]
136037123
Exosome [BR:
afra04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
136037123
Glycosaminoglycan binding proteins [BR:
afra00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
136037123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
136037123
NCBI-ProteinID:
XP_065575680
LinkDB
All DBs
Position
16:15710712..15862543
Genome browser
AA seq
1794 aa
AA seq
DB search
MIMSVKHIFFVAAILAVTLREVDSAACKGCVAGSRCDCQQMKGAPGEVGIPGLQGSYGLP
GVIGPEGPQGPKGSKGDFGAYGMMGERGYRGNSGPPGFTGPAGINGLSGLEGPRGVPGID
GCNGTDGNPGLQGLPGMSGGRGLPGFPGLDGIQGDPGDGGINSIGIKGERGDRGFEGLPG
FKGFSGEEGSRGMGGDIGDDGFPGPSGDAGEAGEPGDMQIGPAGPKGEPGDAGPRGRALS
RPEPVIIGTEVSGSPGEKGPAGDKGNKGQRGLHGLNGVVGQDGYRGNRGNKGEQGADGPR
GKQGRTGPVGAPGQVKGQKGAPGYGGLPGIDGVKGEPGEAGLRGYPGDQGRPGIPGVYDP
SLSLDPMPGPQGSQGPIGPEGDPGEAGLPGLPGFMGFPGSPGLPGPDGLSGMPGLPGLSM
KGEIGDEGSYGPRGINGDYGDPGLVGLPGDKGISGEIAIGPPGPIGRSGLPGRLGQTGQR
GEPGFPGPKGFPGRADQAVGPPGGIGNAGRPGLPGNSGRDGLPGLPGEAGDKGDPFDGPS
VAPKGRKGDIGNPGLHGYYGFRGSPGISGDRGDQGRVGPDGPMGLPGLDGLPGRPGLEGK
PGAKGMAGDLLYVGFASVGMKGSLGDKGFPGPEGLGGLPGREGLRGLDGFQGLKGFRGDG
GDIGDMGLPGRRGRDGLPGFQPEGPGPKGDIGPKGVKGMTGEIGRQGEQGERGSFTEIAE
SLIEDIRGPPGDSGEDGDEGEPGEKGSSGMSGSDGSPGFPGLTGPQGLRGLPGFPGIDGT
KGGVGDDGLPGLSGRAGLRGLDGTDGIKGVKGGRGDDGLPILSGPPGDKGAKGGKGQPGD
NALPGSRGIQGFRGEDGPTGAKGAPGYAGFPGMKGDKGNRGEIQPGIIGNVGLKGVPGDF
GDRGLPGVDGPQGFIGLKGVIGDAGLPGIFGPLGDRGFPGILGRPGLRGNDGLPGLRGKD
GDIGFEGSIGSYGRPGLDGLPGEKGFPGDEGFSGLNGFDGPKGYKGPTGDKGPSGTPGEP
GMNSIYGPKGEAGEFGLYGLTGVPGLPGMNAPKGERGNPGISAAGTDGENGEIGDPGFNG
YDGRDGAKGAFGDRGYSGIQGMQGESGQVGLPGFPGRRGRDGPFGEKGDPGLDGLAGLDG
EYGESGDPGLIGYDGLPGDDGRPGFAGRDGKLGLNGQKGEPGLQGFQGFSGMKGEDGARG
LTGRQGKVGEEGDPGPPGFDGLDGEEGEKGLRGPGGFPGRNGDIGEEGDSGLVGPKGLPG
FNAEKGIPGFPGLPGQRGRFAAPGQKGAPGEYGLNGLPGIPGLPGLSLKGPKGDAGDKGE
FGSPGIRGRLGYDGIPGRPGIIGSKGEQGDQGPSGISFNGMKGETGYDGLPGVPGFKGDL
GEAALDGRPGLIGPKGPSGSPGRPGMPGFRGQYGGKGIQGDLGESGFPGRQGLLGDVGDR
GFTGIKGPDGKMGDPGMPGLPGFDGEKGFDGFDGLPGLSGPKGRRGEIGYSGRPGFQGTK
GVKGPFGDDARPPPQPGSRGFLFTRHSLSTDVPDCPEGTNKMWDGYSLLNFIGDGRAHGQ
DLGAPGSCMKRFNTIPFLFCDLNNVCNYASRNDYSYWLNTGEPMPMNMAPFTNREVTRHI
SRCSVCETPARVIAVHSQSNSIPNCPTGWDDLYIGYSFIMHTDAGAEGSGQSLQSPGSCL
EEFRPVPFIECHGQGTCNYYQTAYAYWMATIEDYDMFRKPRPETLKAGNLLQRISRCIVC
KKRVILRRRKNYTLSQFSAPPLTLVDNGNSQEPQPYLSLNGPVYDDYDYSPDQL
NT seq
5385 nt
NT seq
+upstream
nt +downstream
nt
atgataatgtccgtgaaacatatattttttgtggcagctatattggcggtgacattaaga
gaagttgattctgcggcttgcaaaggctgtgtagctggttcaagatgtgactgtcagcag
atgaaaggggctccgggggaagtgggtattcctggactgcaaggatcctatggtcttcct
ggagtaataggaccagaaggaccccaaggaccgaaaggatctaaaggagactttggagca
tatggaatgatgggagaaaggggctacaggggtaacagtggtcccccagggtttactgga
cctgctggtattaatggcttgtctggtctagaagggccaagaggtgtaccaggaattgat
ggctgcaatggaacagatggaaatccaggactgcaaggccttcctggaatgtctggtggt
cgtggacttcctggctttcctggtcttgatggaatccaaggggatcctggagatggaggt
attaattctattgggataaaaggtgaaagaggggatcgtggttttgaaggtcttccaggc
ttcaaaggattttccggagaggaaggttcacgtggcatgggtggtgatattggtgatgac
ggcttccctggaccaagtggagatgctggagaggctggtgagcctggagatatgcaaata
ggacctgcaggacctaagggagaaccaggtgacgctggtccgaggggaagagcattaagt
agaccggagcccgttataattgggacagaagtcagtggatcacctggtgaaaaggggcca
gcaggagacaaaggaaataaaggccagagaggacttcatggattgaatggagttgttggc
caagatggttacaggggtaatcgaggaaataaaggtgaacagggtgctgatggtccacgc
ggtaagcaaggccgaacaggacctgttggtgcacctggtcaagtgaagggacagaaaggt
gcacctggttacggtgggcttcctggcatagatggcgtgaagggggagccaggtgaagca
ggtctgcgtgggtatccgggagatcagggccgacctggtataccaggagtttatgaccct
tctctctccttagaccctatgccaggtccacaggggtcacagggaccaatcggacccgaa
ggtgacccaggtgaagctggccttcccggattaccgggatttatgggcttccctggttct
cctggcctaccaggacctgatggtctttcgggcatgcctggtctacctggattgtctatg
aagggagaaattggtgacgaaggttcatatggcccccgtggcataaatggtgactatggt
gaccctggtctagttgggcttcctggtgataaaggaatctccggggaaatagcaattggt
cctcctggcccaatcggtcgtagcggtctcccaggacgtctaggtcaaactggacagaga
ggtgagccaggttttcccggccctaaaggttttcctggaagagcagatcaagcagtcgga
cctcctggtggtattggcaatgctggtcgtcctgggcttcctggcaattctggaagagat
ggtttacctggtctccctggtgaagctggtgataagggtgaccctttcgacggtccttct
gttgctcccaaaggtcgaaaaggagatattggcaaccctggtttgcatggctattatggt
tttagagggtctcccggtatttctggagaccgaggtgatcaaggccgagttggtcctgat
ggtcctatgggtttacctggcttagatgggcttcccggcagacctggcttggaaggtaag
cctggtgcaaagggcatggcaggagacttactttacgttggatttgcgtccgtaggaatg
aaaggctctcttggagacaaaggtttccctggaccagagggcttgggaggtcttcctgga
cgtgagggacttagaggattagatggctttcaaggtctgaagggtttccggggtgatggt
ggtgatattggagacatgggattacctggtagacgtggtcgagatggcttgcctggtttt
cagcccgaggggcctggaccgaaaggtgatataggaccaaaaggtgttaagggaatgacc
ggtgaaataggaagacaaggagagcaaggtgaacgtgggtcattcactgaaattgcagag
agtctaatcgaagacatcagaggtccacctggagactctggagaagatggagatgaaggt
gagcctggtgaaaagggtagctctggaatgagtggatcagatggtagccctggtttccct
ggattaactggtcctcaaggcttaagaggactgccaggattccccggaatagatgggaca
aagggaggagttggtgatgatggacttccaggattgtcaggtcgggctggacttcgtgga
ttagatggtactgatggtattaaaggtgtaaaaggaggaagaggtgacgatggactgccc
attttatctggaccacctggtgataaaggagccaaaggaggaaaaggtcaacctggagac
aatgctttgccaggctcccgcggaattcaaggatttaggggcgaagatggtcctactggg
gcaaaaggtgcaccgggatatgctggattccctggcatgaagggtgacaaaggaaataga
ggtgaaattcaaccaggaataattggaaacgtaggccttaaaggggtacccggtgatttc
ggagatagaggtcttcctggagtagatggtcctcaggggtttattggtttgaaaggagta
attggtgatgctggtttgccaggaatatttggtcccttaggagatcgaggctttcctgga
atccttggaaggcccggacttagaggtaacgacggacttccaggtctacgaggtaaagac
ggtgatattggctttgaaggatctattgggtcctatggtcgccctggtctcgatggttta
cctggggaaaaaggcttcccaggtgacgaaggctttagcggtctgaacggttttgacggc
cctaagggctacaaaggaccgactggtgataagggtccgtcaggtactccaggtgaacca
ggaatgaatagtatatatggtcctaaaggagaggctggggagtttggtctctatggctta
actggagttccagggctccctggtatgaatgctcctaaaggagaaaggggaaatccaggt
atatcagctgctggtactgatggagagaatggagaaatcggggatccaggttttaatggc
tatgacggaagagatggagccaaaggcgctttcggagatagaggttattctggtattcaa
ggtatgcaaggcgaatctggccaagtcggacttcctggatttccaggtaggagaggtcgt
gatggtccatttggtgaaaagggagatcctggcttagatggtttagcaggacttgatgga
gaatatggagagtcgggtgatccaggcctaataggatatgacggtctgcctggtgatgat
ggcaggccaggatttgctggtcgggacgggaagcttggtctaaatgggcaaaaaggagag
ccaggtcttcaaggtttccaaggtttctccggaatgaaaggggaagatggagcaagagga
ttaacaggaagacaaggaaaagtcggagaagaaggtgatccgggaccacctggatttgat
ggacttgatggagaagaaggagaaaaaggactacgtggtcccggtggatttccaggccga
aatggtgacattggagaagaaggagatagcggtctagtgggtcctaagggattaccagga
tttaatgctgaaaagggtattcctggatttcctggtttaccgggacagcgtggtcggttt
gcagcacctggacaaaaaggtgcacccggtgaatatggccttaacgggcttcctggtatt
cctggtttgcctggtttgtctttgaaaggtccaaagggcgatgcaggagacaaaggtgaa
tttggatcaccaggaattagaggaaggcttggatatgacggaattcctggtcgtcccggt
ataattggatctaaaggtgaacaaggagaccagggaccttctgggataagtttcaacgga
atgaagggtgaaacaggatatgatggcttacctggtgtccctggtttcaaaggtgactta
ggtgaggcagctcttgatggccgtcctggattgataggccctaagggcccctcagggagt
cctggtcgtcctggaatgcctggcttcagaggacagtatggaggcaagggcattcaaggg
gacctaggagaatctggtttccctggtcgtcaaggtcttcttggtgatgttggcgatcga
ggctttacaggtataaagggcccagatgggaaaatgggtgatcctggaatgccaggacta
ccaggcttcgacggtgaaaaaggttttgatggttttgatggcctacctggcttatccgga
ccaaagggaagaagaggtgaaataggatactcaggaaggcctggttttcaaggaacaaaa
ggggtgaaaggtccatttggtgatgatgcgaggcctccacctcaacctggtagccgcggc
tttctgtttacgcggcattcattatctacagatgttccagactgcccagaaggaaccaac
aaaatgtgggacggatactcgcttctaaattttattggtgatggacgggctcatggtcaa
gacttaggtgcacctggaagttgtatgaaaaggtttaacactataccttttcttttctgc
gacttgaacaacgtctgcaactatgctagtcgcaatgattacagttactggctcaatact
ggtgagccaatgccaatgaacatggcaccgttcacgaatcgagaagtcactcgacacata
tctcgatgtagtgtgtgcgaaacaccagctagggttattgctgtccattctcagtcaaat
tcaatcccgaattgcccaactggatgggatgacttgtatattggctatagcttcataatg
cacactgatgctggagcagaaggttcaggtcaatcccttcaatctccggggtcttgcctt
gaagaatttaggcctgtgcccttcattgagtgccacggacagggtacttgtaattactat
cagacggcctatgcgtattggatggccacaattgaagattatgacatgttcaggaaacca
cggcctgaaacattaaaagctggcaatcttcttcaacgtataagccgttgtattgtctgc
aagaagagagtcatattaagaagaaggaaaaattatactctgtcacagttttcagcccct
ccattaacattagttgataacggtaactcacaagagccgcaaccatatctatctctcaac
gggcctgtctatgatgactacgactattctccagaccagctataa
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