Artemia franciscana: 136037179
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Entry
136037179 CDS
T10524
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7-like
KO
K14409
protein SMG7
Organism
afra Artemia franciscana
Pathway
afra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136037179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afra03019
]
136037179
Messenger RNA biogenesis [BR:
afra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
136037179
mRNA cycle factors
Common to processing body (P body) and stress granule
136037179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_16
HCMV_UL139
TPR_8
TPR_2
Motif
Other DBs
NCBI-GeneID:
136037179
NCBI-ProteinID:
XP_065575803
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All DBs
Position
16:19263399..19308405
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AA seq
862 aa
AA seq
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MKSKEELKRDIARLKNDLSSIALSDEVLIAKIEDLQECYGCLLLQDLDQSLDDKIELDLW
NYCFKGPISKFQSKMSNRKDPKYRELKSRYQHILELSMGFYLSLLESLKEQNDLAFPEQK
KDGSKFIILKKQRIPAINEPSRSSLLYLTQHVYIHLGDLARYRRFLEEAEAYYKQAVGVE
PSNGHAYNQLALLEAAGGIQLSVVFYYVRSVCVKHPFPPGMANLEKVYSKLMEGDPKLSG
KARLNVSDFVTCFLTCMAHLYSMIGLNRVVPLGRLLGSSLSALVAVEAFSAWKLVQISVI
LLHTLHHSSYQMGAASNDNSLVALDEQKSYEQGLDIFAMTLNGLLLAAYTLSPGQNLLEF
PGLPAVKLLLLWIRLNPSILLDRSFVSRLQIWPTLARLLNSLQESKPENTDGLGENIPLP
EDFDVREFLPLQKYLKTLDFKSSSELTYQNTLNLRVRRLLDLGHSIASLDSARVLTVKCH
EDGRLIFEAAVKQGGEVTKELQELSIAKEEILTKGSTPSSDLSQTSSQASEDFRNNNDLP
KRAVVLDEAKKGILKIPNGGIDEGRKTEDNKPTSEETRGNMKIEEKKGILKVLLPDVAEE
KPKKPKNVAISAILRKNAEEKQKEEDERERTTESKTSSKVTFRTHSPPLSHITPEPSQQF
KNLYLERLMLEQRKRNQEAPHQEEYVLFGPRNPIIPPISQPNTGWNPSSFTPIFPPPIYP
RFPAGQDAMQMMNGNMPPTTTGNWGRAGLAYPPITPPLLPDFRHPPPGFFQQGQVTAAAN
DQPTTNGNTEETGSYKLFNTSWPTLTSTVPPPQANATGSLTEGRFGFPGMERTHPPQQAL
WSAAGPSPLEKLLEFQRGQSKT
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcaaagaagaattgaaaagagatattgctcggttaaaaaatgacctgagcagt
atagctctaagtgatgaagtactcattgccaagatagaagatctccaagaatgctatggt
tgcctattattacaagatttggatcagtcacttgatgataaaattgaacttgacctgtgg
aactattgctttaagggacctatttcaaaatttcaatctaagatgtctaaccgaaaggat
ccgaaatacagagaactgaagtcaagatatcagcatatactagagttatcaatggggttt
taccttagtctacttgaatccttaaaagagcaaaatgacctggcatttccagaacagaaa
aaggacggaagtaagttcataattttaaagaaacaaagaataccagccattaacgagcct
tcaagaagttcacttttatatctgacccaacatgtttacattcacttgggagatctcgcc
cgatatcgacgttttctagaagaagcggaagcatattacaagcaagctgttggtgtagag
ccatctaacggccatgcctataatcaactagcgctattagaggcagcaggtggaatccaa
ctgtctgttgttttctattatgtgcgaagtgtttgtgtcaaacatccctttccacctgga
atggctaatttggaaaaggtctattcaaaactcatggagggagatccgaagctaagtgga
aaggctcgtttgaatgtatctgactttgtgacgtgtttcttgacgtgcatggcacattta
tacagcatgattgggttaaacagggtcgttcctttgggtcgtctcctgggatcgtctcta
tctgccttagttgctgttgaagcattttcagcttggaagcttgttcagatctctgttatt
ctgttgcacactcttcaccattcatcatatcagatgggagctgcgtcaaacgacaatagt
ttggttgctttggacgaacagaaaagctatgagcaggggctggacatttttgccatgacg
ctcaatggcctattattagcagcttatacgctttctcctggacaaaatcttttagagttc
ccgggacttcctgcagtgaagctcttactgctttggatcagactaaacccctctatcctg
cttgacagatcttttgtatcccgtttacaaatatggccaacattagccaggctgttgaat
tctcttcaagaatccaaacctgaaaacacggacggtctaggagagaatataccgctgccc
gaagattttgatgttcgtgaatttttacctctgcagaagtatctgaagacgttagatttc
aaatcctcctcggaattgacctaccaaaataccctgaatcttcgtgtgcgtcgtctttta
gatcttggtcattcgattgcatcgctagacagcgctagagttttaacagtaaaatgtcat
gaagatggtcgtttgattttcgaagcagccgtaaagcaaggtggtgaagtaacgaaagaa
cttcaagaactgtccattgctaaagaagaaatattaacaaaaggcagtacaccatcttca
gatctaagtcaaacaagtagccaggctagtgaggatttcagaaataataatgatctacct
aagcgtgctgtagttttagacgaagctaagaagggaatactaaaaatccctaacggtggt
atcgacgaggggagaaagaccgaagataacaaaccgacttctgaggagacaagaggtaat
atgaagatagaagaaaagaaggggattttgaaggtgcttttacctgatgttgcagaagaa
aagccaaagaagccaaagaatgttgcaatctcggctatattaagaaaaaatgcagaagaa
aagcagaaagaagaggatgaacgtgaacgaaccacggaatcaaaaacgtcttcaaaggtc
acatttaggactcattctccaccactttctcatattaccccggaaccttctcaacaattc
aaaaatttgtacttggagagattaatgttagaacagcgaaaacgaaatcaagaagcaccg
catcaagaagaatatgtattatttggcccaagaaatccaatcattccgccgatatcgcaa
cctaataccggatggaatccctcaagctttacaccaatttttccacctcctatatatcct
cgttttccggctggtcaagatgcaatgcaaatgatgaatggcaatatgccaccgactact
actggaaattggggtagagcaggtcttgcctatccacctatcacacctcctttgttgcct
gattttcgacatccgcctccgggattttttcaacaaggtcaagttacagctgcagccaat
gatcaaccaacaactaatggcaatacagaagaaaccggatcttataaattattcaatacc
tcgtggcccactttaacttcaactgtcccaccgccgcaggctaatgccactggttcactc
actgaaggaaggttcggattccctggaatggagaggactcatccacctcagcaagctctt
tggtctgctgctgggccctccccactcgagaagctattggaatttcaacgtggtcagtcc
aaaacctga
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