Artemia franciscana: 136037248
Help
Entry
136037248 CDS
T10524
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
afra Artemia franciscana
Pathway
afra03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
136037248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afra03021
]
136037248
03036 Chromosome and associated proteins [BR:
afra03036
]
136037248
Transcription machinery [BR:
afra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
136037248
Coactivators
SAGA/TFTC/STAGA complex
136037248
Chromosome and associated proteins [BR:
afra03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
136037248
STAGA complex
136037248
TFTC complex
136037248
SAGA complex
136037248
SLIK complex
136037248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
TFIID_NTD2
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_Nup120_160
eIF2A
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
KNTC1_N
Beta-prop_WDR11_2nd
Cytochrom_D1
VPS8_N
Motif
Other DBs
NCBI-GeneID:
136037248
NCBI-ProteinID:
XP_065575933
LinkDB
All DBs
Position
16:complement(23411555..23505988)
Genome browser
AA seq
663 aa
AA seq
DB search
MASVDSNDPANQRNVPDDDKKSLMFVLNYLRKRDLRATEDLLRKETGLSENEADGTIGGF
QSLPRTTGSDPKTYIDSYKSFSKYIDQALDSYRPEMSLVRFPVFVHMYLQLVESSNEDIA
KQFMDKFSVEQEDWFQDDIIRLKNVVRNEQLYGNEFVDSMKNADYTIRMSKDVYSSLKRF
LSDPSNKAVSTTIRDHIQIDSHDGLPRSKETVESLIGSRIGESSSAENKAKVFYGLLREP
DIQYTSIEIEDNENGELAPEGEKPKKKKIKKDSLYGKKSRNDPNAPPNNRIPLPELREVD
VAEKKRAVREAEKRVAIGAENLPSICFYTMMNSSEIVTCIEIAEDSSLIAAGFSDSSLKV
FSLTPQKLRTMKPAEQLLELDREAEDVLARMMDERTGEHTKTLHGHSGPVYDASFSPDRT
MLLSCSEDTTIRLWSLQVWSCLVVYKGHQFPVWSVKFSPHGYYFASGGYDRTGRLWATDH
PQPLRMFAGHHSDVDVVQFHPNSNYVVTGSTDRCIRMWDVLTGKCVFNMTGHKASIQCLS
FSPDGRFLASGDRDGHLHIWDLAHEAAPVAQLPAHDSVIYSITFGRGEGNVIASGSMDYS
VALWDFGKITEDLTEDAMTQYSTDVKKNVDGFLLGRYPTKKTAVLALHFSRRNLLIGAGM
FEG
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagttgatagcaatgatcctgctaatcaaagaaatgtgcctgatgatgacaag
aaatcgcttatgtttgttttaaattacctgaggaaaagggatttgagagctactgaagat
ttacttcgtaaagaaactggtctgtcagaaaatgaagcagacggaactattggcggattt
cagtcattgcccaggacaactggcagtgacccgaaaacatatattgattcatacaaaagc
ttttccaaatacatagatcaggctttggatagctatcgtcctgaaatgtcgctagtgagg
tttcctgtctttgttcacatgtacttacagcttgttgaaagcagcaatgaagacattgct
aagcagtttatggacaagttttctgttgaacaagaagactggtttcaggatgatataata
cggcttaaaaatgtcgttcgaaacgaacagctatacggcaatgaattcgttgattcgatg
aaaaatgcagattatacaattcgcatgtcaaaagatgtatattcttctttaaaaagattt
ttgtccgatccatcaaataaagctgtttcaacaacaatccgtgatcatatacaaatagat
agtcacgatggattgcctcggagtaaggagacagttgagtctttgataggttctcgaatt
ggagagtcgtcttctgctgaaaacaaagccaaagtgttttatggacttcttcgtgagcca
gatattcagtatacttcgatagaaattgaggacaatgaaaatggcgaacttgcccctgaa
ggggagaaaccaaagaaaaagaagataaaaaaagattcactctacggaaagaaatctcgt
aatgacccaaatgctccaccgaataataggatacctttgccagagttgagagaagtcgat
gttgctgagaaaaagagagcggtgagggaggctgaaaagagagtggcgattggtgcagaa
aatctaccatcaatttgcttttatacaatgatgaactcgagtgaaatcgttacatgtata
gaaattgctgaagattccagtttgattgccgctggattttccgattccagcttaaaggta
ttctcattgactccgcagaaacttcgcacgatgaaaccagctgaacaactcctagaactt
gatcgtgaagcggaagatgttttggctagaatgatggatgaaagaacaggcgaacacacg
aaaacgcttcatggtcacagtggacctgtttatgacgcaagttttagtcctgaccgtaca
atgctcctctcgtgctccgaagatacgacgattcggctttggagcttacaagtctggtcc
tgtcttgttgtctataaaggacatcagtttcctgtttggagtgtgaagttcagtccacat
ggctattattttgcgtcgggtggctatgacagaactggaagactctgggctacagatcac
ccccaaccgcttagaatgtttgcaggtcatcattccgacgttgatgtggttcaatttcac
ccgaactcaaactatgttgtgactggatctacagatcgttgtatcaggatgtgggacgtc
ctcacaggcaaatgtgtattcaacatgacaggccataaagcatcaatccaatgtttaagc
ttttcgcccgacggtagatttctggcatctggcgatagagatggacacttacatatatgg
gatttggcccacgaagcagcgccagttgcgcaacttcctgcacatgatagtgtcatttat
tcaatcactttcggtagaggagagggaaatgtcattgcttccggtagcatggattactca
gtggctctctgggatttcggcaaaataaccgaggatttaacagaagatgcaatgacccag
tattccacggatgttaagaagaatgtggatggatttttgcttgggaggtatcctacgaaa
aagacagcagttttggctctgcacttttcgagaagaaacttgcttattggtgcaggaatg
tttgaaggataa
DBGET
integrated database retrieval system
