Artemia franciscana: 136038580
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Entry
136038580 CDS
T10524
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16-like
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
afra Artemia franciscana
Pathway
afra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136038580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afra03041
]
136038580
Enzymes [BR:
afra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
136038580
Spliceosome [BR:
afra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
136038580
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
WHD_HA2
DEAD
AAA_22
AAA_19
Flavi_DEAD
PWI
nSTAND3
AAA_30
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
136038580
NCBI-ProteinID:
XP_065577846
LinkDB
All DBs
Position
2
Genome browser
AA seq
1011 aa
AA seq
DB search
MSSAGLLNWVNDSLHDILGLSDKSITHFLIGLAKKSSSLSALETQLVRTGAIEINPSVQK
FLAELWSKLPQNIQVGPTQGEILRAERQEKLRQAVALQQKNQSYQLLPEEEENEERIKYR
PPKKKKKEDSKQSSSEDEEKLIERDIKERDELVERLKAKDLKKTKKSSSKSERRAAEEAA
KRLKMEKEDRSKIIPQLRKESRRTYLQKRKGDKLIELEQDIIDDEYLFAEEELTERERKE
REKKKMLLQLAKGHEMASEMEKVSRYHMPEESKTTALTKKYVEVDEKERAPYSEQRKWEE
ERVAVAQWKFGARDAKAKVEQDYEYVLDDTIDFVQMLKLPGTKEIEEAPKISEAEIKKIS
LQETRRSLPIFPFREDLLKAIEDHQILIIEGETGSGKTTQIPQYLYEHGFTKDGKKIGCT
QPRRVAAMSVAARVAQEMNVKLGNEVGYSIRFEDCTSERTLVKYMTDGMLLREFLSEPDL
SSYSVMIIDEAHERTLHTDILFGLIKDISRFRSDLKLLISSATLDAEKFSEFFDDAPVFR
IPGRRFPVDIYYTKAPEADYIDACVVTVLQIHVTQSLGDILVFLTGQEEIETCLEILQER
TRKLGKKIKELLVLPIYANLPSDMQAKIFEPTPPGARKCILATNIAETSLTIDNIIYVID
PGFAKQNSYNPKTGMESLVVTPISKASANQRAGRAGRVAAGKCFRLYTAWAYQNELEENA
IPEIQRVNLGNVVLLLKSLGINDLVHFDYLDPPPYETLALALEQLYALGALNHRGELTKI
GRRMAEFPCDPMMSKMLLASEKYKCASEACTIAAMLSVNSSVFYRPKDKVLQADTARKNF
FVPGGDHLSLFNVYDQWEESGFSSQWCYENFIQHRSMKRARDVRDQLEGLMQRVEIEMTS
SPTETESIRKSITAGYFYHTARLSKGGYKTVKHNQPVLVHPNSSLFEDLPRWVIYHELVF
TTKEYMRQVIEIENKWLLEVAPHYYKAKDLEDSLSKKMPKEKGKSKEELGD
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagcaggtctcttaaattgggtcaatgactctcttcatgacattttaggtcta
agtgataaaagcataacacattttttgattggactggccaagaagagctcttctttatct
gcattagagacacagcttgttagaactggggcgattgaaataaatccatctgttcagaaa
ttccttgctgagttatggtcaaagctgccccagaatatccaagttggtccaacacaggga
gaaattctacgcgccgagaggcaagagaaactgcgccaagctgttgccttacagcaaaag
aatcaatcctatcagcttcttcctgaagaagaggaaaatgaagaaagaattaaatataga
ccaccaaagaaaaagaaaaaggaagattctaaacagtcgagttctgaagatgaagaaaag
ctaatagaaagagatatcaaggagcgtgatgagcttgttgaaagattgaaggcaaaggac
ctgaaaaagactaaaaaaagcagttctaaatcagagagaagagctgcagaagaagcggcc
aagcgtttgaaaatggaaaaggaagatcgatccaagataattccacagctgaggaaagaa
tctcgtcgtacgtatttacagaagcgaaaaggagataaactcattgaattagaacaagat
attatagacgatgaatatctctttgccgaagaagaacttactgagagggagagaaaagaa
cgagagaagaagaagatgcttttacaattagcgaaagggcacgaaatggcaagtgaaatg
gaaaaagtcagtcgatatcatatgccagaagaatctaaaacaacggcgctgacgaagaaa
tatgtagaagtggacgaaaaagagagggcaccctactcagagcagaggaaatgggaagaa
gagcgagtcgctgttgcccagtggaaatttggtgctcgtgatgcaaaggctaaagtagag
caagactatgaatatgtcttggatgacaccattgattttgttcaaatgctgaaactccct
gggacaaaagaaattgaagaagcgccaaaaatatcggaagcagaaattaagaagatctct
ttgcaagaaacacgcagaagtctaccgatttttcctttcagagaggacctactcaaagcc
attgaagatcatcaaattctcattattgaaggagagacaggctctggcaaaactactcaa
atcccacaatacttatatgaacatggtttcacgaaggacggaaagaaaattgggtgcacg
caaccccgtcgtgtggctgcaatgtctgtcgcagctcgtgttgcacaagaaatgaatgtt
aaacttggaaatgaagtgggttacagtattcgtttcgaagattgtacgtcggaaaggaca
ttggttaaatatatgacggatgggatgctacttagagagtttttgtctgaaccagattta
tcaagctatagcgttatgataatcgacgaggcccatgaacgcacactacatacagatatc
ctttttggtcttatcaaagatatatcaaggttcagatcagatctcaagttgttgatttca
agtgcaactttggatgcagagaagttttccgaatttttcgacgatgctcctgtatttaga
attccaggtaggagatttccggtcgatatttattataccaaagccccagaagctgattat
attgacgcttgtgttgtaactgttctccaaattcacgtgacacaatcattaggtgacatt
ttggtgtttttgactggtcaggaggagattgaaacctgtttagaaattcttcaagaaaga
acaagaaaattaggaaagaaaatcaaagagcttttggtcttgccgatttatgccaatttg
ccttcagatatgcaagctaaaattttcgaaccaacgccgccaggagcaagaaagtgtatt
ctagctaccaatattgctgagacatcattgacaatcgacaatattatttatgtcattgat
ccgggatttgcaaaacagaattcatacaatcccaaaactggaatggagtccctagttgtt
acgccaatttccaaggcctcggccaatcagagggcaggacgagctggtcgagttgcagcc
gggaaatgttttaggctgtacacggcatgggcctaccaaaatgagctagaagaaaacgct
attccagaaattcagagggtaaaccttggcaatgttgttctactacttaaatctcttggt
atcaacgatctcgttcattttgactatttggatcctcctccttatgaaactctcgctctt
gctctggagcagttgtatgctctgggagcattaaatcatcgtggagaacttaccaaaata
ggaagaagaatggcagaatttccttgtgatccaatgatgtcaaaaatgcttttagcgtca
gaaaaatacaaatgtgcatccgaagcctgtacaatagctgcaatgctctcagtgaacagt
tctgttttttatcggccgaaagacaaagtacttcaagctgacactgcaagaaaaaatttc
tttgtccctggaggggatcacctgtcacttttcaatgtttacgaccaatgggaagaaagt
ggtttttcatctcaatggtgctatgaaaatttcattcagcatcgatcgatgaaacgagca
agagatgtacgggatcaactggaaggtttaatgcaacgtgttgaaatcgaaatgacttct
agtccaacagaaactgaaagcatcagaaagagtatcactgctggatatttttatcacact
gctagattatcaaaaggtggatataaaacagtaaagcataatcagcctgtcttagtccac
cccaatagcagtttatttgaggatcttccccgatgggtcatctaccatgagctggttttc
acaactaaagagtatatgagacaggtcatcgaaattgaaaataaatggcttcttgaagtt
gctcctcattactacaaggcaaaagatttggaagattcattatctaagaaaatgcccaaa
gaaaaaggaaagtctaaagaagaattaggagattga
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