Artemia franciscana: 136038897
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Entry
136038897 CDS
T10524
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
afra Artemia franciscana
Pathway
afra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136038897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afra03041
]
136038897
03009 Ribosome biogenesis [BR:
afra03009
]
136038897
Enzymes [BR:
afra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
136038897
Spliceosome [BR:
afra03041
]
Complex A
U1 snRNP components
U1 related factors
136038897
Complex B
136038897
Ribosome biogenesis [BR:
afra03009
]
Eukaryotic type
Pre-60S particles
Helicases
136038897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Utp25_C
Motif
Other DBs
NCBI-GeneID:
136038897
NCBI-ProteinID:
XP_065578449
LinkDB
All DBs
Position
2:22618099..22620088
Genome browser
AA seq
515 aa
AA seq
DB search
MSTTYLKQSYTRRQGDSAGGYYPRFKESFNRRFEYYDNSGVNSFKPKQRTGSSESYQKHV
YSPHSDIVKRSNEEIECYRASNEILVEGDDVPRPITAFKEAGFPDYLQSQLTSQGFDSPT
PIQAQGWPIALSGRNMVGVASTGSGKTLAFVLPSIVHIKHIIAKEARGNGPIALVLAPTR
ELAQQIKVVADKYGEPSRIRSACVYGGSPKGPQLRDLERAELCIATPGRMNDFLEARKTN
LRQCTYIVLDEADRMLDMGFEPQIRKIFDQMRQDCQILMWSATWPKEVRRLAKDFVGEHI
MLNVGSTNLSASHNIKQIVDVCEEDEKASKLHFFLNKISKEQQKKIIIFVETKKRVEFIA
RTIYRAGHNVGAIHGDKIQEERDKVLNAFRSGRRNILVATDVAARGLDVDGVDFVINYDY
PQNSEDYIHRIGRTGRSNQTGTAYTFFSRKDGSKANDLIRVLSEANQVVRPELQDIAKKF
TETGSNKFGYRYGFGRRGGFRGRNDYRSYPASRRW
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaacgtatttgaaacaaagctacactagaagacaaggtgatagtgcaggagga
tactatccccgttttaaggagtcttttaatagacggtttgaatattatgacaattccggc
gtaaactctttcaagccaaaacagagaacgggtagctcagaatcatatcaaaaacatgtg
tattctccgcattctgatatcgtgaagagatctaatgaggagatagagtgttaccgtgct
tccaatgaaattttagttgaaggagatgatgtgcctcgcccgattacggcatttaaggaa
gctgggtttcctgattatttacagtctcagttgacatcacaaggttttgatagtccaact
ccaattcaagctcagggatggcctatcgctttatctggtagaaatatggtgggtgtggcg
tcaacaggatcaggaaagacgttggcctttgtactaccatctattgttcatattaaacat
attattgcgaaagaggcgagggggaatggacccatagctttggttttggccccaactaga
gaattagctcagcagattaaggttgtggctgacaaatatggagaaccatctcgcattaga
agtgcatgtgtctatggaggttctcctaaggggcctcagttacgcgatttagaacgagct
gaactctgtatagctacacctggaagaatgaatgacttcttagaagcaagaaaaacaaac
ctcaggcagtgtacatacatcgtcctggacgaagcagatagaatgcttgatatgggtttt
gaacctcaaattagaaaaatttttgatcaaatgagacaggactgtcaaattctcatgtgg
tctgccacttggccgaaggaagttagacgtctagccaaagattttgtcggcgaacatatt
atgttgaacgttgggtcaacgaatctctcggccagccataatattaagcagattgtcgat
gtatgcgaggaagatgaaaaagccagcaagctgcatttttttcttaataaaatctcaaaa
gaacaacaaaaaaaaataataattttcgtcgaaactaagaaacgggtagaatttattgcc
agaacaatttacagagccgggcataatgtcggtgccattcatggtgacaaaattcaagag
gaacgagataaggttctcaatgcattcagaagtggtaggagaaatatattggtggcaaca
gatgttgcagctcgcggtctagacgtggacggcgtagacttcgtgattaactacgattat
ccccaaaacagtgaagattatatacacaggataggaagaacgggaagatccaaccaaact
ggtaccgcttacacattcttctcacgaaaggatggaagcaaagcaaatgatttaatcaga
gtcctttctgaagcaaatcaggtggtaaggccggaattgcaggatattgctaagaagttc
accgaaacaggcagcaataaatttggttatcgctatggctttggaagaagaggtggattt
cggggacgtaatgactaccgaagttatcctgcttccagacgatggtaa
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