Artemia franciscana: 136039136
Help
Entry
136039136 CDS
T10524
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
afra Artemia franciscana
Pathway
afra03020
RNA polymerase
afra03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
136039136
09124 Replication and repair
03420 Nucleotide excision repair
136039136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afra03021
]
136039136
03400 DNA repair and recombination proteins [BR:
afra03400
]
136039136
Enzymes [BR:
afra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
136039136
Transcription machinery [BR:
afra03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
136039136
DNA repair and recombination proteins [BR:
afra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
136039136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
136039136
NCBI-ProteinID:
XP_065578696
LinkDB
All DBs
Position
19:complement(445183..522995)
Genome browser
AA seq
1179 aa
AA seq
DB search
MYQDDELDPMYEEDDSDEISAELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSIQRI
VEDTPPIELQAEAQHISGEIETPTKYTVKFEQIYLSKPTHWEKDGTATPVMPNEARLRNL
TYSAPLYVDIVKTIIRDGEDPVVHEHQKTFIGKIPIMLRSTYCTLNNLNDRDLAELNECP
LDPGGYFIINGSEKVLIAQEKMATNTVYVFALKDSKYCYKTEIRSCIENSSRPVSTLYVN
MMAKGGQNLKKSAIGQRIIAIVPYIKQEIPIMIVFRALGFVADRDILEHIIYEFDDPEMM
EMVKPSLDEAFVIQEQNVALNFIGARGARPGVTKDKRIKYAREILQKEMLPHVGISDFCE
TKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLMSLLFRGLFKTLTKEVRMY
AQKFIDRGKDFNIELAIKPKFITDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST
LSHLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQP
SPILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMTTLRKLRRQMDIIV
SEVSMVRDIQDREIRIYTDAGRICRPLLIVENQRLLLKKTHIEQLKEKEYNNFVWNDLVA
SGVVEYVDTLEEETAMIAMAPDDIRLDNEGYCATYTHCEIHPAMILGVCASIIPFPDHNQ
SPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLCYPQKPLVTTRSMEYLRFRELPAGINS
IVAILCYTGYNQEDSVLMNASAVDRGFFRSVFFRSYKDAETKRAMAGASEETFEKPSRDT
CQGMKHPQSYDKLDNDGIIAPGIRVSGDDVVIGKTVTMPENDDELSSAAKRYSKRDCSTF
LRNSETGITDQVMLTLNTEGFKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMP
FSAEGTAPDIIINPHAIPSRMTIGHLIECIQGKVSANKGEIGDATPFNDAVNVQKISNLL
QDYGYQLRGNEVMYNGFTGRKLVSQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPM
EGRARDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRVHICDFCGLIAIANLKNSSF
ECKGCKNKTQVSQVKLPYAAKLLFQELMSMNIAPRLMTI
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaggatgatgaattggaccccatgtatgaagaagatgacagtgacgagatttca
gctgaactatggcaagaagcttgttggattgttattaatgcctattttgatgaaaaaggg
ctggttcgacagcagctcgactcatttgatgaatttattcaaatgtcaattcaacggata
gttgaagatactcctcctattgagctgcaagcagaagctcagcacatttcaggtgaaatt
gaaacgccgacaaaatacactgtcaagtttgaacaaatttacctttcaaaacctacccat
tgggaaaaggacggcacagcgactcccgtgatgcctaatgaagctcgcttgaggaatctc
acctattcagcacctttgtatgtcgacattgtgaagacgattattcgtgatggcgaagat
ccagttgtacatgagcaccaaaaaaccttcattggaaaaatacccattatgcttcgctct
acctactgcactctcaataacctcaatgacagagatctcgctgagctgaacgagtgtccc
ttggaccctgggggctacttcattatcaacggctctgagaaggtgttgattgctcaggag
aagatggcaacgaacacagtttacgtttttgctttaaaggacagcaagtactgctacaaa
acagaaatacgatcgtgtattgaaaactcgtcgaggcctgtgtcaacactctatgttaac
atgatggctaagggaggacagaatttgaagaaatctgccattggacagcgcataatcgca
atcgttccttacatcaaacaagaaataccaattatgattgtatttcgagctcttggattt
gttgctgacagagatattttggagcatattatttatgaatttgacgatcccgaaatgatg
gagatggtcaaaccctctttggatgaagcttttgtcattcaagagcagaatgttgcgctg
aattttattggagctcgtggcgcacgacctggtgtcaccaaggacaagcgtattaaatac
gctcgtgaaattttacagaaggagatgttgccacatgttggaatttcagatttttgtgag
acaaagaaggcctactttttggggtacatggtacacagacttcttttagctgcccttggt
agaagagaactggatgacagagatcactatggcaacaaacgacttgatttagctggtcca
ttgatgtcgttactattcagaggcttgttcaaaactttaacaaaagaagtaagaatgtac
gcccagaagttcattgatcgcggaaaagatttcaatatagagctggccattaaaccaaaa
ttcatcactgatggattgaagtactccttggccacaggcaactggggtgatcagaagaaa
gcccatcaagctcgagctggggtatctcaggtgctaaacagattgacgttcgcctccaca
ttgtctcatttgagacgtgtcaattctccaattggtcgtgatgggaaattagccaaacca
cgtcagctccacaacacactctggggcatgatttgtccagctgagactcctgaaggtgct
gctgtaggtctggtgaaaaacttggccttgatggcttacatttctgttggatctcaaccg
tctccaattcttgagtttttagaagaatggtctatggagaacttggaagaaatagcgcca
tccgccatagcagatgcaacgaaaatctttgtaaatggatgttgggtcggaattcataga
gaccctgagcaactgatgacaacactgcgcaagcttcggagacaaatggacatcattgtc
tcagaagtatcaatggtgcgtgatattcaagatcgtgagattcgtatctatactgatgcg
ggaagaatttgccgtccacttttgattgttgaaaatcaacgcttgcttttaaagaagact
catatagaacagctcaaagaaaaggaatataataactttgtctggaatgacttggtagct
agtggagtcgttgagtatgtcgatactctcgaagaagagacggcgatgattgccatggct
cccgatgatattcgtcttgataatgagggatattgtgctacgtacactcactgtgaaatt
caccctgctatgattctgggtgtttgtgcgtcaatcattccgtttcctgatcacaatcaa
tctcccaggaatacttaccagagtgctatggggaaacaagccatgggtgtttacattacc
aatttccatgttaggatggacacgttggcacacgtattgtgctatccacagaagccgcta
gtaacaacccgttctatggaatatttaagattccgagaattgccggccggtatcaattcg
attgttgccatcctttgctacactggatataatcaagaagactcggtacttatgaacgca
tcagctgtagatcggggattctttaggtcagttttcttccgttcctataaggacgctgaa
acgaaaagagcaatggcaggagcgagtgaggagacatttgagaagccctctagagacaca
tgccaaggtatgaagcatccccagtcttatgacaagttggacaatgacggtattatagcc
cctggcattcgagtgtctggggatgatgttgtaattggaaaaactgtcaccatgccagaa
aatgatgatgagctctcgagtgcagcgaaaaggtacagcaagcgggattgttcaacattt
ttacgtaattctgaaacagggattacggaccaagtcatgctgaccttaaacacggaaggt
ttcaagttttgcaaaatcagagttagatctgtccgtattccacagattggcgacaaattt
gcgtctcgccacggccaaaagggtacatgtgggatacagtatcgtcaagaggacatgcca
ttttcagcagagggaactgcgcccgacattatcattaatccccatgctatcccgtctcga
atgaccattggtcacttgatcgagtgtattcaaggaaaggtctcagcaaataaaggagag
atcggtgatgccactccgttcaacgatgctgttaatgtgcagaaaatctcaaatcttctt
caagattacggttaccagttaagagggaacgaagtgatgtacaatggatttacggggaga
aaactcgtgtctcaggttttcttaggacctacctattaccaacgtcttaaacatatggta
gacgacaaaattcattcacgtgcccgtggacctgtgcaaattctggttcgtcaacctatg
gaaggtcgtgcaagggatggtggcttgcgatttggtgaaatggaacgtgactgtcagata
tctcacggtgctgcacaatttcttcgtgaacgtctgtttgaagtgtctgacccataccga
gttcacatctgtgatttttgtggtttaattgccattgcgaacttgaagaacagtagcttt
gaatgcaaaggatgtaaaaacaagacacaggtatctcaagtgaaacttccttatgctgcg
aaactgctttttcaagaattgatgtctatgaatattgctcctaggctaatgacaatttaa
DBGET
integrated database retrieval system
