Artemia franciscana: 136039144
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Entry
136039144 CDS
T10524
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
afra Artemia franciscana
Pathway
afra03008
Ribosome biogenesis in eukaryotes
afra03013
Nucleocytoplasmic transport
afra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136039144
03015 mRNA surveillance pathway
136039144
03008 Ribosome biogenesis in eukaryotes
136039144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afra03019
]
136039144
03009 Ribosome biogenesis [BR:
afra03009
]
136039144
Messenger RNA biogenesis [BR:
afra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
136039144
mRNA cycle factors
Stress granule specific factors
136039144
Ribosome biogenesis [BR:
afra03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
136039144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
TAP_C
Tap-RNA_bind
NTF2
UBA_8
LRR_8
LRR_4
LRR_9
UBA_4
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
136039144
NCBI-ProteinID:
XP_065578702
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All DBs
Position
19:913468..963262
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AA seq
599 aa
AA seq
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MGRQNKFKGQRRPERSGFDEEERRLVYSEESYDQRMHHRREDFPRFRDGRIGRQKKKGQK
YNFDRQLQEDLSYAKEERQEPRRDYRRGGPRHIPSGVELWNRITIKNVKATKDELLKSII
EACPVPFVPVYYHLRGEFGFFFVESSEAASAIQRLHITLPVQGKIEFGETRRMPIQNIPV
DERVQIKLRQVLERRYDPLTQSLDLSNFHYDESLCHEYYIPLSRPMNMKEVMRIITENTK
DLKNLDLSDNKLQNLDNVEILVDKSVEVKALNVSNNRIQSLNVFAKLKGLPLESLILDGN
PIATRLKEKGNDTYRREIRRFFPKVVVLDSDVLPAPVTFDVEPDGFKVPDTQPKFLVNEG
VNDVLHTFVNQYYSFYDQGRRSELSEAYHEDVLFSLTAGPLPKNEENQFKLGAYFMESRN
LMRIKESSVRSKKVRRGRSETIKLLETLPKSVHDPESFRYDVTIVTDTLMSINLKGVFRE
ETDSKSVIRSFTRFFVICPTPRGGYYIINDLLFISNASKAQEKVAFKPVETPLKIEPSTS
SGLETVQREMIAQFSVQSGMNVTYAQQCLESRNWDYNAAAELFQQMVAANAVPPEAFQR
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgggaagacagaataagtttaaaggacaaagaaggcctgagcgttcaggttttgacgaa
gaagaacgtcgcttagtttattcagaggaaagctatgatcaaaggatgcatcatagaaga
gaagattttcctcggtttcgggacggaagaattggtcgtcagaagaaaaaggggcagaaa
tacaattttgatagacagctacaagaagatttaagttatgctaaagaagaaaggcaagag
ccaaggcgtgactatagaagaggaggaccaaggcatattcctagtggggttgaactttgg
aatagaataactatcaagaatgtaaaggctacaaaagatgaattgctcaaatcgataatt
gaagcttgtcccgtaccttttgtgcctgtatattatcacctgcgcggagagtttggcttt
ttctttgtggaatcttctgaagcagctagtgcgatacaacggttacacataacgctacct
gtccaaggaaagattgaatttggtgagaccaggcgcatgcccatccaaaatatccctgtg
gacgaaagagtgcaaataaaattgagacaggttctcgagcggcgttatgatccacttacc
cagtctctggatctgtcgaatttccattatgacgagtctttatgtcatgaatactacatt
cctttatcacgtcctatgaatatgaaagaagttatgcgaatcataacagagaacactaaa
gacttaaaaaacttggacttgagtgacaataagcttcaaaacctggataatgtggagata
ctagtagacaaatctgtggaagtaaaagctttgaacgtttcaaataataggatacagagt
ttgaacgtttttgcaaaactgaaggggctgccattggagagtcttatcctagatggtaat
cccattgcaacgagattgaaagaaaaagggaacgatacgtatcgcagagaaattcggcgg
ttcttccccaaggtggttgtattggattctgatgttttacctgcgcctgtaacgtttgat
gttgaacccgatggtttcaaggtgcctgacacacagccgaagttccttgttaatgaagga
gttaacgacgttttacatacgtttgtcaatcagtattacagtttctacgaccagggtcga
agaagtgagttaagcgaagcttaccatgaagatgtcttatttagtctgactgcgggaccc
cttcccaaaaatgaagaaaatcaattcaaattgggtgcctattttatggaatcaagaaat
ttgatgagaatcaaagagtcgagcgtccgatcaaaaaaagttcgacgtggaagatcagag
acaattaaactgctcgagactctgcctaaatcagtacatgacccagagtcattccgttat
gatgttactattgtaactgacactttgatgtcaatcaatttgaaaggcgtctttagagaa
gagactgactccaaaagtgttattcggtcatttacaagattttttgtcatttgtcctaca
ccacgtggaggctattacatcataaacgacctactcttcatttcaaatgcgtctaaagcc
caagaaaaggtggcatttaagccagttgaaacaccgttgaagattgagccaagcacttca
tcaggattagagacagtccagcgggaaatgatagctcagttttctgtgcagagcggaatg
aacgtgacatatgcacaacaatgtcttgaaagtcgtaattgggactacaatgcagcagct
gaactctttcaacagatggttgcggcaaacgctgtacctcctgaagcttttcagcgatag
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