Artemia franciscana: 136039346
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Entry
136039346 CDS
T10524
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6-like isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
afra Artemia franciscana
Pathway
afra03015
mRNA surveillance pathway
afra03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136039346
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
136039346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afra03019
]
136039346
Messenger RNA biogenesis [BR:
afra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
136039346
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Gene cluster
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
136039346
NCBI-ProteinID:
XP_065579068
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Position
19:16594971..16644673
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AA seq
539 aa
AA seq
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MAGSREENDIDLYAEDIGDDFPEETDAVDLYNDVITSGVDKNGLKGKHVKQDGRSEEKFE
GGYGHSQGGKRYQLYVGNLTWWTTDQDIVNAVKQLGIADFIEVKFYENRANGQSKGFCMV
TVGSEQSLRNCLENLGKRPIYNMMPEVTYASKQALFALEAASKTRPEPGPSPQQPPPQLG
PPLGMRPPHNGPPNQRPPFLPPHLSVGPRPGMPLGPPPPGMHGGPPMGMPPRGMHPSMHR
PDRPPPGFAVNGPPPHQRPGMLPLGPVAPPPGPPPRGMMPPGVPPGVSPPAAHGAPPPGP
PPMGAPPGVPPPVNRPPTALPPPGVPPPIPGGPAPHVNPAFFPPPHHPPPVSFPTASAPP
PAGIADQPTISEAEFEEIMSRNRTVSSSAISRAVADAAVGDYASAIETLATAISLIKQSK
VAGDDRCKILITALKDTLSGIEAKSYGSRRERSRSRDRDRRRRHRDRTRSRSRDREYRSR
TPDRDRDRYEREKRERSRDYDRTRDRDREDRYRYQEERYREKERGRTRDRDEDSEHRRH
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggctggatcgagggaggagaatgatattgatttgtatgctgaagatattggagatgac
ttccccgaagaaacggatgctgtggatctttataatgatgttataacatctggtgtagac
aaaaatggacttaaagggaaacatgtgaaacaggatggaagaagtgaagaaaagtttgaa
ggtggttatggtcatagtcagggtggaaagaggtaccagctgtatgttgggaacttgacc
tggtggacaactgatcaagacattgttaatgctgtaaaacagttggggattgctgatttt
atagaggttaagttctacgaaaatcgggccaatgggcagtcaaaaggattttgtatggtt
actgttgggtcggaacaaagtttaagaaattgtcttgaaaatcttgggaagcgcccaatt
tacaacatgatgccggaagtgacgtatgcttcaaagcaagccctatttgcacttgaagct
gcatcaaagactcgtcctgaacctggtccatctcctcaacaacctcctccacaactaggt
cctcctctcggtatgaggcctccacataatggaccaccaaatcaaaggcctcctttcttg
ccaccacacctctcagtaggtccaagaccaggaatgcctttaggaccacctcctccggga
atgcacggaggacctccaatgggtatgcctcctagaggaatgcatccttcaatgcataga
cctgaccgacctcctccaggatttgctgtaaatggtccacctccacatcaaaggcctgga
atgcttccattaggaccagtcgctccgcctccaggtcctcctccaagaggaatgatgcct
cctggtgtccctcctggtgtttcgcctcctgcagcccatggagctccaccgccaggtcca
cctcccatgggtgccccaccgggcgttccacctcctgttaatagaccaccaacagctttg
ccgccgcctggtgttccccctcctattcctggtggaccagcccctcatgtgaatccagca
ttctttccacctcctcatcatcctccaccagtaagtttcccaacagcaagcgctccaccc
cctgctggaatagctgaccaaccgactatatctgaggctgagtttgaagagataatgagt
cggaacagaactgtttcgagttcagccatttcaagagcggttgctgatgcagcagttggt
gattatgcaagcgctattgagactctggccacagccattagcttgataaagcagtcaaag
gttgctggtgatgatagatgtaaaatattaataactgccttgaaagacactcttagtgga
attgaagccaagagctatggatcaagaagagagcgctcaagatcccgggatcgtgaccgc
agaagaagacacagagaccgcacaaggtcccgaagtagagacagagaatatcgttctagg
accccagatcgggatcgtgaccgctatgagagagagaaaagagaaagatcgagagactat
gatcgcactcgtgacagggatcgtgaagacagatacagatatcaggaagaacgctaccgt
gagaaagaacggggaaggacaagagaccgagatgaagacagtgaacatcgtagacattaa
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