KEGG   Artemia franciscana: 136039827
Entry
136039827         CDS       T10524                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein-like isoform X1
  KO
K12857  Prp8 binding protein
Organism
afra  Artemia franciscana
Pathway
afra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:afra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    136039827
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:afra03041]
    136039827
Spliceosome [BR:afra03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    136039827
 Complex C
   U5 SnRNP specific factors
    136039827
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_EIPR1 WDR90_beta-prop_4th NBCH_WD40 Beta-prop_SPT8 Ge1_WD40 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_Vps41 eIF2A Nbas_N Beta-prop_RIG_1st Beta-prop_HPS5 Beta-prop_NUP159_NUP214 WD40_like
Other DBs
NCBI-GeneID: 136039827
NCBI-ProteinID: XP_065579803
LinkDB
Position
20:complement(17518289..17551569)
AA seq 346 aa
MKRRYDDTHDMVAVAKRPNNELVAVSQRGKQIQIAGPPRTSSLLAPIMLLSGHGGDIFCG
KFHPDGTMFASAGFDRQILLWNVYGECENYAVLQGHTGAILDLQFNTDGSLMATASTDKI
VSLWDPFTGSRLKKLKGHTSFVNSCHMSRRGVQFICSGADDCTVRVWDARRKGECHNFNA
NYPVTAVTFNDSSECVISGGVDNDVKVWDLRKKAVLYKLSGHGDTVTGLSLSPDGNLLLS
NSMDGTLRIWDVRPYCPGDRCLKIFSGNQHNFEKNLLRCSWSPKGNRIAAGSADRLVYVW
DVYSRKVAYRLPGHNGSVNDVQFHPSEPIISSVSSDKNIYFGEVEP
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgaaaaggcgctatgatgacacacatgacatggtagcagtagcaaaaagaccaaataat
gaattggttgctgtatcacaaagagggaaacaaatccagattgcagggccaccacggaca
tcgagtcttttggctcccataatgcttttgtctggtcatggtggagatattttctgtggt
aaatttcatccagatggtacaatgtttgctagtgctggattcgataggcaaatattgctc
tggaatgtgtatggagaatgtgagaattatgctgttttgcaaggtcatactggcgctatt
ttggatttgcaatttaacactgatggatcgctgatggcaactgcatccaccgataaaatt
gtctcactgtgggatccattcactgggagtagattaaaaaagcttaaaggacacacttca
tttgtcaactcctgtcatatgtcgcgtcgtggtgtgcagtttatttgcagtggtgcagat
gattgtactgttcgtgtgtgggatgcacgacgcaaaggggaatgccataattttaacgca
aattatcctgtaacagcagttactttcaatgattcttctgagtgtgttatatcaggaggt
gttgataatgatgttaaagtctgggatttgaggaagaaagctgttctttataaactgtct
gggcatggtgacacagtaactggcctttcattaagtcccgatggtaatttattattgtca
aattctatggatggtactcttcgtatttgggacgttaggccttattgtcctggtgaccgg
tgcttaaaaatatttagtggaaaccaacataattttgaaaagaatcttttacgatgttcg
tggtcaccaaaagggaaccgcattgctgcaggatcagctgatcggctggtttatgtgtgg
gatgtgtactcaagaaaagttgcttaccgtcttccaggacacaatggaagcgttaatgat
gtgcagtttcatcctagtgagcctattatttcttctgtgtcaagtgataaaaatatatat
tttggagaagtagagccttga

DBGET integrated database retrieval system