Artemia franciscana: 136039950
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Entry
136039950 CDS
T10524
Name
(RefSeq) E3 ubiquitin-protein ligase parkin-like isoform X1
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
afra Artemia franciscana
Pathway
afra04120
Ubiquitin mediated proteolysis
afra04137
Mitophagy - animal
afra04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
136039950
04120 Ubiquitin mediated proteolysis
136039950
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
136039950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afra04131
]
136039950
04121 Ubiquitin system [BR:
afra04121
]
136039950
03029 Mitochondrial biogenesis [BR:
afra03029
]
136039950
Enzymes [BR:
afra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
136039950
Membrane trafficking [BR:
afra04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
136039950
Aggrephagy
Other aggrephagy associated proteins
136039950
Xenophagy
Other xenophagy associated proteins
136039950
Ubiquitin system [BR:
afra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
136039950
Mitochondrial biogenesis [BR:
afra03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
136039950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
IBR_2
IBR_1
ubiquitin
IBR
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
136039950
NCBI-ProteinID:
XP_065580033
LinkDB
All DBs
Position
2:complement(29833708..29905425)
Genome browser
AA seq
471 aa
AA seq
DB search
MIVRSVFKDFWNWIIQIMERMLSLNAAVSPCKNTFVITIKTNLGKSCSLNLDKKWSIKDC
KQLLANKWQCSHEDLRIIFAGKELPNDFLLENSNIGEHSILHAIKIVQSSSAVSGSSAEN
ESPLVEQSLLNRIENLPIKGEIEENKAAKIRRVHFYVYCSTCSGIKVGKLRVCCSVCQDG
AFTVSRDPCGWKDVLTPQQIPGTCEGNDCRDAFAEFFFKCAEHPYVSENDRSVVLPLLRT
NTKDVSCLACTEISEVVLVFSCESSHVTCLDCFRSYCQSRLNERNFVHDPILGYTLPCPV
GCTGSLIEEAHHFKVMDDVDYNRYQRFATEEFVLSAGGVLCPQPGCGMGILAERDCKRIQ
CQMLGCGFVFCRECLQGSHLGDCQLVANGNCESNNGNYSVNAARAAQARWEEDSETTIKI
ITKPCPKCRTPTERDGGCMHMQCTRSSCHYEWCWVCQTGWTRDCMGSHWFG
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtaaggtctgtttttaaagacttttggaattggattattcagataatggaacga
atgcttagcctcaatgctgctgtgtctccgtgtaaaaatacatttgttatcacaataaaa
actaatctgggaaaatcgtgctccttgaatcttgataaaaaatggtctataaaagattgt
aagcagcttttggcaaataagtggcagtgtagccacgaagatcttcgaattatttttgct
ggaaaagaactgcctaatgattttctcttagagaactcaaatattggagaacacagcatc
ttgcatgctattaaaattgtccaaagttcatctgctgtttctggttcaagcgcagaaaat
gaaagccccttggtagaacaatctttgttaaataggattgaaaatttacctataaaagga
gaaattgaagaaaacaaagctgctaaaattcgacgagttcatttttatgtatactgttct
acatgcagcggcataaaagtaggaaaacttcgagtttgttgttctgtttgtcaagatggt
gcctttaccgtttcaagggacccctgtggatggaaagatgtcttaactccgcagcaaatt
ccagggacatgtgaaggaaatgactgtcgtgatgcctttgccgaattcttctttaagtgt
gcagagcatccttatgtgagtgaaaacgacaggtctgttgttttgccgcttttaaggaca
aatacgaaagatgtttcatgtttagcttgtactgagataagtgaagtcgtccttgttttt
tcttgtgagtcttctcatgtcacgtgtcttgactgcttccgctcctactgtcaaagtcgc
ttgaatgaaagaaattttgtgcacgatccaatccttggatatacgctaccctgtcctgtt
ggatgcacaggatctctcattgaagaagcacatcacttcaaagtcatggatgatgttgat
tataatcggtaccagaggtttgcgacagaagaatttgttctttctgctggaggagtgctt
tgcccgcaaccaggctgtggaatgggaatactagctgagcgtgactgtaaacgaatacag
tgtcagatgttaggatgtggatttgtattttgtcgggagtgcttgcaaggttctcatctt
ggcgattgtcagctcgttgcaaatggaaactgtgaaagtaacaatggcaactatagtgta
aatgctgcaagagcagctcaagccaggtgggaagaagacagtgaaacaactataaaaatc
attacaaaaccatgtccaaaatgccgaacacccacggaaagggacggaggatgtatgcac
atgcagtgtacacgatcaagttgtcactatgaatggtgttgggtgtgccaaacgggatgg
actcgagactgcatgggctcacattggtttggttga
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