Artemia franciscana: 136040082
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Entry
136040082 CDS
T10524
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B-like isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
afra Artemia franciscana
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afra03036
]
136040082
03400 DNA repair and recombination proteins [BR:
afra03400
]
136040082
Chromosome and associated proteins [BR:
afra03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
136040082
DNA repair and recombination proteins [BR:
afra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
136040082
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
Cnd1
SCD
HEAT_GCN1
HEAT_2
IHHNV_capsid
Motif
Other DBs
NCBI-GeneID:
136040082
NCBI-ProteinID:
XP_065580232
LinkDB
All DBs
Position
2:30458298..30570367
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AA seq
1252 aa
AA seq
DB search
MGKDDALVYPTGCKPVEDDMNTDELIRRLKTLAHILQTMGQDDGSLRKFTPLAMHLAQDA
FMNHDSRDVQLLIACCIADVLRIYAPEAPYIDPDHIKSIFMFLIRQLNGLRDPKDPAFKR
YFYLLENLAYVKSFNMCFDLEDSQEIFCALAALVFKIVNDEHSAKVKSFMLDLLHPLITE
SDSVSNELLDIILSNIVEPHKTQRKNAYLLAKELIVKCSDTLQPYIRSFFQSVMIVGNKD
ESNLYIARKIYDLLYELNDICPSVLLSVLPQLEFKLKSTDEKERMESVSLLARMFSVKDS
RLAYEHKQLWRAFLGRFNDINYKIRVKCVQYSMHFLLNHPELRQDIVEALRLRLHDSEEA
VRYEVVMAVVSTIRKDFSVVSDNEDLLNFIKERTLDKKFKIRKEAMQGLALIYKTFITET
DVPDATRRAVTWIKDKILHAYYMPSQDDRLLIEKLFNTCLVPYTLPPEQRMRKLYYLYAT
IDENATRALNEMHKHQQGVRKHMGELIEQVKRSDITAEQRETDLVIRINMIARIMPYPVR
GAEYLQKLCQQMLNDSVLVRDLEIMVNNNSSCKDSADAFRRVLKKLGMPVMTNLYHSTIK
MLLERMSSVIVDHEALKHLIELIQSCLIDPEFSHELGIPEEEAGEKGLKLLMMLSYVYPG
HFLHEDILLDLVSFLDVEENSIAPNILAVLTFVGKHKSLSSVSPGAVQKLLPLCERFAVT
GTTKQAKNAVRCLVANVPQEEHEELFTNILNQLKTNLEDPSSEHYLTGIVSAGHIAQNVS
LGKNFQVQMKNLVARQIVRELLMKELNDRNYVIDEEWIEESELPLECLCRVEGFKMLARW
LIGLKTDTFSAQKTFRMITCFIQNKGDVLQTGKFGKAEMAWLRLAAGSAFLKICEQKGVG
DQFQTDQFYTLSSLMLDDVPQVREKFSAKLNKGLVTGVPFFCLPLDFMGMYVYGGLEQDK
NLRGKMKRYMEVAISKRRDYIRTMTLSGLSEGVSDALGHILPDYMLLFAITILTHCPEYE
LHDDAGILHQFKKCLWFILEPLINKNEGYSFGFYKQMIEKAKNCKDATNPNDAEMNKKLW
TICDLAMVLILQKTTNFDLKEGEVEVRIPPMYFLKSEDPNWVNAAVYLPLELQHNLKNVA
PSASISHPMQRTTKRPRITHNESKIIVGTIPMDDYEDEEEEEEEVPPLHKESRLDISTRS
NQGQKLTIRPTTSTRGRPPGSKNKAIILTTKASSSTTAADSQIATRSTRHQK
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggatgatgcattggtttacccaactgggtgtaagcctgttgaagatgatatg
aatactgatgaattgataaggcgtcttaagacactggcacacatccttcaaacaatgggt
caagatgatggaagccttcgaaagttcacaccccttgcaatgcacctggctcaagatgct
tttatgaaccatgattcaagggatgtccagctacttattgcttgctgtattgctgacgtt
cttagaatatatgcacctgaagcaccttatattgatccagatcatatcaagtccattttt
atgttcctcatacgtcaactgaatggactgcgtgaccccaaggatccagcttttaagcga
tatttttatttgcttgagaaccttgcttacgttaagtcctttaacatgtgctttgacctt
gaggattcacaggaaattttttgtgcccttgccgctcttgtctttaaaatagtcaatgac
gaacattcggcgaaagtgaagtcttttatgttggatcttctgcacccattaattactgaa
tccgattccgtctccaatgagttgttagatattatcctgtctaacattgtcgagccacat
aagacacagaggaagaatgcatatttgttagcaaaagaattgattgttaaatgcagtgat
acccttcaaccatatattagaagtttctttcaaagtgtgatgatagttggaaacaaagat
gagtcaaatttgtatatagctcgaaagatatatgacttgctctatgagctcaatgatatt
tgtccttctgtcttgttatcagttctacctcagcttgaatttaaactgaagagcactgac
gagaaggagcggatggaaagtgtctctcttttggctcgtatgttctctgtcaaggattca
agactggcttatgagcataaacagttgtggagggcatttcttggaaggttcaatgatatt
aactacaagatacgtgtgaagtgtgtacagtattcaatgcattttcttttaaaccatcca
gaattaagacaggatattgttgaggctcttcgattgcgtcttcatgattcagaggaagca
gttagatacgaagttgttatggctgttgtttctacaattcgaaaagactttagtgttgta
tccgataatgaagatttgttgaacttcattaaagagagaactttggacaaaaagttcaaa
atcaggaaagaagccatgcaagggcttgctttaatttacaagacatttatcaccgaaaca
gatgtacctgatgcaacacgccgtgcggttacttggataaaggacaaaatactgcatgct
tattatatgcctagccaggacgatagacttttgatcgagaaactcttcaacacttgtctt
gtaccttacacactacctcctgagcaaagaatgagaaagctttattatctttatgcaacg
attgatgagaatgctacaagggcccttaatgaaatgcacaagcatcagcagggagttcga
aagcacatgggagaactaatcgagcaagtaaaaaggagcgatataactgctgaacaacgg
gaaactgatttggtcattcgaatcaacatgatagccagaatcatgccatatccagtgagg
ggtgctgaatacttgcaaaagctctgtcagcaaatgctgaatgatagtgttttggttcgg
gatttggaaataatggttaacaataattcgtcgtgcaaagactcggctgatgcatttagg
agggttttgaagaagcttggaatgcctgttatgacgaatttgtatcacagcacaataaaa
atgcttcttgagcgaatgagcagtgtaattgttgatcatgaagcgttgaaacacttgatc
gaactcatccaatcttgtcttattgatccagaattttcccatgagctgggcatacctgaa
gaggaggctggtgaaaagggactaaagttgttaatgatgcttagctatgtctatcccggt
cattttcttcacgaagacattctgttagatttggtatcttttttggatgttgaagaaaac
agcattgcacccaatatactggcggtattgaccttcgttgggaaacacaaatcactcagc
tctgtatcaccaggtgctgttcaaaaactattgccattatgtgagcgttttgctgtgaca
ggtactacgaaacaggctaaaaatgctgttcgttgtctagttgccaatgtacctcaggaa
gaacatgaagagctttttacaaatatattgaatcaattgaaaacgaaccttgaagatcca
tcgtcggagcattatctcacaggaattgtgtctgccggccacatagcacagaatgtttct
cttggcaaaaattttcaagttcagatgaagaacctggttgctagacagattgtgagagaa
ctgttaatgaaggagcttaatgacaggaattatgtcatagacgaagagtggatagaggag
tcagaacttccattagagtgtctttgtcgagttgaaggcttcaagatgttagcaagatgg
ttgatagggttgaaaacggatacattttcggctcaaaagacttttagaatgatcacatgc
tttatacaaaataaaggagatgttcttcaaacgggtaaatttgggaaagcagagatggcg
tggcttcggttggctgcaggatctgcttttttgaagatctgtgaacaaaaaggagtaggt
gatcaatttcaaactgaccagttctatacgttatcttcattaatgttggatgatgtgcct
caagttcgggaaaaattttctgccaaactcaacaaggggcttgtcactggcgtgccattc
ttttgcctgccgttagatttcatggggatgtatgtatacggtggtcttgaacaagataaa
aatttacgtggtaaaatgaaacgctatatggaagtagccatttcaaaacgtcgtgactat
attcgaacaatgacactgtctggactctctgagggagtgagtgatgcattgggtcatatt
ctccctgactatatgcttctatttgccatcacaattcttacacattgtccagaatatgag
ctacatgatgatgccggtattttgcaccaattcaaaaaatgtttatggtttatattagaa
ccactgatcaataagaatgaaggctattcttttgggttttataaacaaatgattgaaaaa
gcaaagaactgtaaagatgcaacaaaccctaatgacgcggaaatgaataagaaactttgg
acaatttgtgatttggcaatggttttgattcttcaaaagactaccaattttgatttgaaa
gaaggagaagtggaagttcggatacctccaatgtattttctgaaaagtgaagatccaaat
tgggtcaatgctgctgtttatcttccccttgagcttcaacacaacctgaaaaatgtagca
cctagtgctagtatatcacatcccatgcaacgaactactaagcgaccgaggataacccat
aatgagagtaaaattattgttggtaccatacccatggatgattacgaagatgaagaggag
gaggaggaagaagttcctcctctccataaagaatccagacttgatatatctactcgatct
aatcaaggacaaaaactaacaatcagacctacaacatctacgagaggaaggcctcctgga
tcaaaaaataaagcgattatcctgacgactaaagcttcgtctagtacaactgccgccgac
agtcagattgcaaccagaagtacaagacatcagaaatga
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