Artemia franciscana: 136040910
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Entry
136040910 CDS
T10524
Name
(RefSeq) ATP-dependent RNA helicase Ddx1-like isoform X1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
afra Artemia franciscana
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afra03041
]
136040910
03016 Transfer RNA biogenesis [BR:
afra03016
]
136040910
Enzymes [BR:
afra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
136040910
Spliceosome [BR:
afra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
136040910
Transfer RNA biogenesis [BR:
afra03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
136040910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
PGK
Motif
Other DBs
NCBI-GeneID:
136040910
NCBI-ProteinID:
XP_065581400
LinkDB
All DBs
Position
21:32392964..>32455513
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AA seq
735 aa
AA seq
DB search
MAAFEEMGVLTEIAKRAEEVEWMLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPV
LQIVWESLKDILQGKGTKSGDKSDVPPFWGMSLFDRTEKLAVTPDGLRCQSRDFKEWHGG
RGNRGVSGKGRYYYEATVCDEGLCRVGWATAEASLDLGTDKLGFGFGGTGKKSNSKQFDT
YGEPFGMMDVIGLYLNLDDGEISFSKNGQDFGVAFKIPKPISINVFYPTICLKNAEIHVN
FGDKPFKYPPKTGYIPISQAPSNNVITNQVVSSGPKETTPPKPNAPQAIIIEPSRELAIQ
TAKEIDSFSKYLENPRVRAMVAVGGIPVKDQIQSLQNGVDVVIATPGRLEELISQGCMSL
SQVRFFILDEADGLLQQGHGDLVNRLYGKMPKVSSEGRRLQMIVCSATLHSFDVKKLAER
LMHFPTWVDLKGQDSVPDTVHHVVVLVDPRKDKWWQNLRRRIRTDGVHAADNLNPNNLTP
EMLSEAVKLLKGEYCIRAIDEHKMDQALIFCRTKQDCDNLEIFFKSVDGRGNPNPKYTCV
CLHGDRKPQERAENLAKFKKREVKFLICTDVAARGLDITGLPFMINMTLPDEKSNYVHRI
GRVGRAERMGLAISIVSAVPEKVWYHGEWCSSRGKNCSNTRLTDQRGCCIWYNELNCLAE
IEDHLGVTVPQVGSDIKVPVDEFEGKVIYGQKRIGAGSGYQTHVGQLAPAVRDLAALESQ
TQILYLKRKHALKGR
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggctgcattcgaagaaatgggtgtgttgacagaaattgccaaaagagctgaagaagta
gaatggatgcttccaacggatgttcaagctgaggctattccactcatacttggtggaggt
gacgtcctcatggcggcagaaacaggaagtggaaaaactggtgccttttgtttaccagta
cttcagatcgtatgggaaagtctaaaagacattcttcaagggaaaggaaccaaatccggt
gataagtcagatgttccccctttttggggtatgagtctttttgatcgaacggagaagctt
gctgtcaccccagatggactacgttgtcagtcacgtgacttcaaagaatggcatggtgga
agaggaaatcgtggtgtgtctgggaaaggtcgctattattacgaagctaccgtttgtgat
gaagggctgtgcagagtcggatgggcgacagctgaggcatcattggaccttggaacggac
aagttgggatttggcttcggtggcactggcaaaaagtctaacagtaaacaattcgataca
tatggtgagccttttggcatgatggatgtcataggactgtaccttaatctcgatgatgga
gagatcagtttttcaaaaaatggacaggactttggtgttgctttcaaaattccaaagcct
atatctattaatgttttttatccaaccatttgtctaaagaatgcagaaattcatgtcaat
tttggagacaagccatttaaatatcctccaaaaacaggatatataccaatatcgcaagca
ccatctaataatgtgatcactaatcaggtagtttcaagtggaccaaaagaaacaactcca
ccaaagcccaatgctcctcaagctatcatcattgagccgtcaagggagttagccatccaa
accgccaaagagattgatagcttttccaaatacctcgagaaccccagagttagggcaatg
gttgccgtgggtgggatacctgtcaaggatcaaatacagagtcttcagaatggagtagat
gttgttattgctactcctgggcgtttggaagaattgattagtcaaggatgcatgtcgctc
tctcaagttcgcttttttattcttgatgaagctgatggcttactccagcagggacatggg
gatcttgtcaataggctctacggtaaaatgccaaaggtttcgtctgaaggaaggcgactg
caaatgatcgtttgctcagctaccctacactcctttgatgttaaaaaactggcagagcgt
ttgatgcatttcccaacctgggttgatctaaaaggacaagattctgtgcctgatactgtt
catcatgttgtcgttttggtagaccctagaaaagacaagtggtggcaaaacttaagaaga
cgcattagaacggatggtgtccatgcagctgacaacttaaatcccaataaccttactcca
gagatgctctctgaggctgtaaagctgttgaagggtgaatattgcattcgggctattgac
gaacataaaatggaccaagctctcattttttgtagaactaagcaagactgtgataacttg
gaaatcttcttcaaatcagttgatggtagaggcaatcctaatccaaagtatacatgtgta
tgcctgcatggtgacagaaagcctcaagagagagcagaaaacttggccaaattcaaaaag
agggaagtcaaattcttgatttgcactgatgtcgcagcgagaggattggatatcactgga
ttgccattcatgattaatatgacccttcctgatgaaaagtctaattatgttcatagaatt
ggccgtgttggacgtgcagaaagaatgggtctagccatatctattgtatctgctgtacct
gaaaaagtgtggtatcatggagagtggtgctcatcaagaggaaagaactgcagcaatacg
agactcactgatcaacggggctgttgcatttggtataatgagcttaattgcttggctgag
atagaagatcacttgggtgtcactgttcctcaagttggaagcgacataaaagtacctgtt
gatgaatttgaagggaaagtcatttatggtcaaaagagaattggggcaggatcaggatat
caaacacatgttgggcaattggctcccgccgttcgtgatttggctgctctagaatctcaa
actcaaattctgtacttgaaacgcaagcatgctctgaaaggacgttaa
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