Artemia franciscana: 136040951
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Entry
136040951 CDS
T10524
Name
(RefSeq) LOW QUALITY PROTEIN: replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
afra Artemia franciscana
Pathway
afra03030
DNA replication
afra03410
Base excision repair
afra03420
Nucleotide excision repair
afra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
136040951
03410 Base excision repair
136040951
03420 Nucleotide excision repair
136040951
03430 Mismatch repair
136040951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afra03032
]
136040951
03400 DNA repair and recombination proteins [BR:
afra03400
]
136040951
DNA replication proteins [BR:
afra03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
136040951
DNA repair and recombination proteins [BR:
afra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
136040951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_30
AAA_22
PTCB-BRCT
RuvB_N
AAA_14
AAA_16
BRCT_2
AAA_33
nSTAND3
RNA_helicase
AAA_19
AAA_18
AAA_5
AAA_28
AAA_6
Motif
Other DBs
NCBI-GeneID:
136040951
NCBI-ProteinID:
XP_065581473
LinkDB
All DBs
Position
21:20069984..20147843
Genome browser
AA seq
1050 aa
AA seq
DB search
MDIRRFFSPSGGKSTDKNDKNKKRSTEEEDPVSKKKSHKKLVIIDSDEEEPIRKEKTKQE
SAKKSEKLKPVVVTDELFSTKKSKFTNIKDKSDGDSLHKIEEVKIPPASKLSQRMKEGDS
NSKYKNKEKYTSPGKQKRKKELELSDEESPIKSSKKRKSDEAAHEKNSSKKKEDERSPKN
LAKSSKEEKRMSGSKEEEIKDKEEKKEKEKHKVRRIKVESDEEDPFDIITVKKTEKARDK
KKKESPTSKKKGKTYELEVTPAEKKVKAEPKLEPHPEEQKEQESGLEGEQKRKSFNYQQY
LAREGPKNLGSKQIPEGAEGCLAGLTFVITGVLDSLERDQAEELVKKYGGKATHSVSGKT
SFIVAGEGAGPAKLEKAKNQGIKVINEDDLLEMIKTRPGSSDAPPPVKTPKRKKKEESAE
ESPISNKMKKTEKAKVSPVSEKAKAEEKKKTAEKAEDIKPIDDSKMGKSSESSSSQWVDK
YRPTTIKQVVGQQGDKSCLNKLIKWLRNWHKYHAPGAKPARPALWAKDDDGGFYNAALIS
GPPGIGKTTTAHVVAKDLGFDVVEMNASDTRSKRLLKEEVSELLTTKSLASFARGQKDQK
PSANHLLIMDEVDGMAGNEDRGGIQELIQLIKSSRIPIICICNDRSHPKIRSLVGYCFDL
RMPRPRIEQIRGLIMSICFKEGIKIKPEAIDDMIRGTDFDIRQIINNLSVVAAKEKNVSS
EGAKKDASASKKDVRMGPWDVIHKVFSAEEHKKMSIHDKSNMFFQDYSLGPLFVQDAYLQ
VVPHAAKGDEKKTLELISKSSDSLCDGDLVDRIIRSTNAWSLLPVQAIYSSVIPGDLMEG
HFVGQIGFPQWLGKNSTTNKNDRLLQHLQMHMRLRISGSKRAVNLDYIQYIRDAVTRPLI
KEGTDGVEKSVEAMTSYDLIREDLGDILXLTTWPGRKDPMSQVEAKVKSAFTRTFNKEGH
LTPYADMKMSKVRGGGGFATAGLDEEDMTAEEEEALLEEDEDEDDLKKDAMIKVKSKPRS
KKTEGDSTSKGKGKVTQGGNKPARGRGRGK
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggatattcggagattcttctcaccttctggtggcaaatccacagacaagaatgataaa
aataagaagcgttctacagaagaagaagacccagtatctaagaaaaaatctcataaaaag
ctagttataattgattcagatgaagaagagccaataagaaaagaaaagacgaaacaagaa
tcagcaaaaaagtcagagaagctgaagccagtcgtagttactgacgagctttttagcacc
aagaaatcaaagtttaccaacatcaaagataaatcggacggagattcgcttcataaaatt
gaagaagtgaaaataccacctgcctcaaagctgtctcaaagaatgaaagaaggagattcg
aactctaaatacaaaaacaaggaaaaatatacaagccctggcaagcaaaaaagaaaaaaa
gagttagaattgtctgatgaggaaagcccaattaaatcttcaaagaagaggaaatctgat
gaagctgcacacgagaaaaacagtagtaaaaaaaaagaagatgaaagaagtccgaaaaat
ttggccaaaagcagtaaggaagaaaaacgaatgtcaggtagcaaagaagaggaaataaaa
gataaagaggaaaagaaggaaaaagaaaagcataaagttcggagaatcaaagtagaatca
gacgaagaagacccttttgacattattacagtgaagaagactgagaaagcgagagataaa
aagaagaaggagtctcctacttccaaaaagaaaggcaaaacctatgaactggaagtgacg
ccagcagaaaagaaggttaaagctgaacctaaactcgagccccatcctgaagaacaaaag
gaacaagaaagtggtttagaaggagaacagaaaaggaaatcgttcaattatcagcagtat
ctggcaagagaaggacctaaaaatcttggaagtaaacaaataccagagggggctgaaggc
tgcttagctggattaacttttgtcataaccggagtgctagattctttagaacgtgaccaa
gctgaagaacttgttaagaaatatggtggaaaagctacgcactcagttagtggtaaaaca
agctttattgttgccggtgaaggggctggtccagccaaattggaaaaggctaaaaatcaa
ggtatcaaagttataaatgaagatgatttattggaaatgatcaagactcgcccaggctcc
tccgatgctcccccgcctgtaaaaaccccgaagaggaagaaaaaagaagaatccgcagaa
gaatctccaatctcaaataagatgaagaagactgagaaagcgaaagttagccctgtatca
gaaaaagccaaagctgaggagaagaaaaagactgctgaaaaagctgaagatataaaacct
attgatgattcaaaaatgggtaaatcgtctgaaagttcatcgtctcaatgggttgacaag
tatcgtccgacaaccatcaagcaagtagttggtcaacaaggcgacaagagctgtctgaat
aagctcataaaatggcttcggaattggcataaatatcatgctccaggtgccaaaccagca
cgccccgctctttgggcaaaagatgatgacgggggattttacaacgctgccttaatatct
ggcccgccgggaattggaaaaactacaacagcacacgtagtagccaaagacctaggcttt
gatgtggttgaaatgaacgcctctgatacaagatcaaagagacttttaaaggaagaagta
tcggaacttttaacaactaaatctcttgctagttttgctcgtggtcaaaaagatcaaaag
ccatctgcgaatcatttactgattatggacgaagttgacggaatggccggcaatgaagac
agaggaggtatacaagaattaattcagttaatcaaatcaagtcgtattccaatcatctgt
atttgtaacgacagatctcatccaaaaattcggagtcttgttggctattgcttcgatcta
agaatgccaagaccaaggattgaacagattaggggattaataatgtcaatctgtttcaaa
gaaggtataaagatcaaacctgaagccattgatgacatgatcagaggcacagattttgat
attagacaaattatcaacaatctttcagttgttgctgcgaaggagaaaaacgtttcatca
gaaggtgcaaaaaaagatgcctctgcttcaaaaaaggacgttagaatgggcccgtgggac
gttattcataaggtattctcagccgaagaacacaagaaaatgtctattcatgacaagtca
aacatgttttttcaagattacagccttggaccgttatttgttcaagatgcttatcttcaa
gttgtcccacatgctgcaaagggagacgaaaaaaaaacattggagttaattagtaaatca
tctgatagcctatgtgatggagatcttgttgacagaattatccggagtacaaacgcttgg
agcctactccctgttcaggcgatttattcaagtgtaatacctggcgatctaatggaagga
cattttgttggtcaaataggattcccacagtggcttggaaaaaattcaaccactaacaaa
aatgatagattgctccaacatcttcaaatgcatatgcgactaagaatctctggtagcaaa
agagcagtgaatttggactacattcagtatataagggacgcagtcactaggcctctgata
aaagagggtacagatggtgtagaaaagtcagttgaagctatgacatcatatgatttgatt
cgagaagatttgggtgatattttantcttgacaacctggcctggaaggaaagatcctatg
agccaagtggaagctaaggtgaaatctgcattcactcggacctttaataaagagggacat
cttaccccctatgctgatatgaaaatgtctaaagtcagaggaggtggtggcttcgccact
gcagggctagatgaggaagacatgactgctgaagaagaagaagctcttttagaagaagat
gaagatgaggatgatctgaaaaaagatgctatgatcaaggtgaaaagtaagccacgaagc
aaaaaaactgaaggcgattcgacaagcaaaggcaaaggcaaggtaactcagggtggtaat
aaacctgcaagaggaagaggaagaggaaaataa
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