KEGG   Artemia franciscana: 136041034
Entry
136041034         CDS       T10524                                 
Name
(RefSeq) E3 ubiquitin-protein ligase NRDP1-like
  KO
K11981  E3 ubiquitin-protein ligase NRDP1 [EC:2.3.2.27]
Organism
afra  Artemia franciscana
Pathway
afra04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:afra00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    136041034
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:afra04131]
    136041034
   04121 Ubiquitin system [BR:afra04121]
    136041034
   03029 Mitochondrial biogenesis [BR:afra03029]
    136041034
Enzymes [BR:afra01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     136041034
Membrane trafficking [BR:afra04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    136041034
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    136041034
Ubiquitin system [BR:afra04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    136041034
Mitochondrial biogenesis [BR:afra03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-dependent mechanism factors
    136041034
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-RING_6 zf-rbx1 zf-RING_UBOX U-box zf-C3HC4_3 zf-RING_5 HIP1_clath_bdg zf-ANAPC11 Sina_ZnF zf-RING_16 zf-Nse zf-RING_10 zf-C3HC4_4 UPF0242 TRAF3_RING SYCE1 LRS4 Prok-RING_4 zf-TRAF_2 Cob_adeno_trans PARP_regulatory RRP4_S1 FlaC_arch RING_XB3-XBAT31
Other DBs
NCBI-GeneID: 136041034
NCBI-ProteinID: XP_065581636
LinkDB
Position
21:complement(24340871..24370659)
AA seq 215 aa
MGIDTARFSGDIDGDLLCSICTFVLEDPAQAPICEHVFCNTCITEWLTSSQTCPIDRTNL
TIDALKPAPRILRNFLSRLTLSCSNQTHGCPASLTLERFAAHLLECNFNPKRPVTCQSGC
GMTILFEEHGNHNCIQSLKIELAIVQKENKEKNEEQEEKMSRMQSELDLLKAEIDALKKV
IKEKQPASSDLQLLPTVGQSQAVHQGTLVWWYSWN
NT seq 648 nt   +upstreamnt  +downstreamnt
atgggaattgatacagcaagattttcgggagacattgatggagatctgctttgttctatt
tgcacatttgttttagaagaccctgctcaggcgccaatatgtgaacatgtgttttgtaat
acttgcattactgagtggttaacatcaagccagacttgtcctattgacagaaccaattta
actattgatgctttgaagcctgctccaaggatcttgaggaattttctgtctagattaacc
ttgagctgtagcaaccagacacatggatgtcctgcctcattgacattggaaagatttgca
gcacatcttcttgaatgcaattttaaccccaaaagacctgttacttgccaatctggatgt
ggaatgacaatactctttgaagaacatggcaatcataactgtatacaaagtctgaagatt
gaattggcaatagttcaaaaagaaaataaagaaaaaaatgaagaacaggaagaaaaaatg
tccaggatgcaatctgaattggacttacttaaagcagaaattgatgcattaaaaaaagtt
atcaaagagaagcagccagccagttcagatttgcaactattaccaacagttggacaaagt
caagcagtacatcagggcacattggtgtggtggtacagttggaattaa

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