Artemia franciscana: 136041988
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Entry
136041988 CDS
T10524
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
afra Artemia franciscana
Pathway
afra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136041988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afra03019
]
136041988
Messenger RNA biogenesis [BR:
afra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
136041988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
136041988
NCBI-ProteinID:
XP_065582884
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Position
2:complement(42569821..42599929)
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AA seq
291 aa
AA seq
DB search
MAVDNTIIANPLKLLKYTEVLEYSLKGGLRPDGRTPGEAREAAISSGFIGTANGSGCMKL
DRTSAVCGIKVELSKVPLSYTKGNFSCKVQFPAVCSVNSRKGQIQQTDICNSIELLISEL
IEPGIINLPGTEKPLIKLEDLRILDTNWVWNLDANVLCTSYDGNATDVCIGAFVAALKSL
ELPAVVVNKDDGKPLIDENGPRTGLALNSHPFSTTFALYDQILLMDPTGLEEEALFGNSL
TIISDGKEPIKVSKSGGSISATKLREAINIANIRQATLFQLMMDNGESIDK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgataacacaataattgcaaatccgcttaaattgctgaaatacactgaagtt
ctggaatattctttgaaaggtggactgcgaccggatggaagaactcctggtgaagcaaga
gaagctgctatatcatccggttttattggtacagcaaatggctcgggctgtatgaaactt
gatcgaacctctgctgtgtgtggtatcaaagtggaattgtcaaaggttccattaagttac
acgaaagggaatttttcgtgcaaagttcagtttcctgcagtttgttcggtgaattcacgt
aaaggtcaaatacagcaaacggatatatgtaactccattgagcttttaatatcagaacta
attgagccaggaataataaatcttccaggaactgagaagccattgatcaagcttgaagac
cttcgaatattagacacaaattgggtttggaacttagatgctaatgtcttgtgtacatct
tatgatggaaatgctactgatgtctgtattggagcatttgttgcagcgttgaaaagctta
gaactgcccgctgttgtagtaaataaggacgatgggaaacctttaattgacgagaatggg
ccaagaacaggactagctttaaatagccacccgttctccacaacatttgctttgtacgac
caaatcctacttatggatcccaccggtttggaagaagaggctttgtttggtaacagctta
acaattatttcagatggaaaagaaccaattaaggtctcaaaatcaggagggtcaatctca
gccacgaagctcagagaagccatcaacattgcaaatattaggcaggccactctattccag
ttgatgatggacaatggagagagtattgataaataa
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